DSSP Stride: Difference between revisions

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= News =
= News =
2014_01_24_Update: The plugin is able to cope with empty chain name now.
* 2014_01_24_Update: The plugin is able to cope with empty chain name now.
2012_10_22_Update: The most recent version of DSSP (v2.0.4) does not consider residues after the first [http://www.wwpdb.org/documentation/format33/sect9.html#TER <tt>TER</tt> record] from the same chain. The plugin has been updated to cope with this new feature.
 
* 2012_10_22_Update: The most recent version of DSSP (v2.0.4) does not consider residues after the first [http://www.wwpdb.org/documentation/format33/sect9.html#TER <tt>TER</tt> record] from the same chain. The plugin has been updated to cope with this new feature.


= External links =
= External links =

Revision as of 04:34, 27 January 2014

Introduction

Type PyMOL Plugin
Download plugins/dssp_stride.py
Author(s) Hongbo Zhu
License -
This code has been put under version control in the project Pymol-script-repo

DSSP and Stride are popular tools for assigning secondary structures for proteins. DSSP & Stride Plugin for PyMOL provides a graphical user interface for coloring proteins according to their secondary structures assigned by DSSP or Stride. Most recent DSSP & Stride Plugin code can be obtained from this link.

News

  • 2014_01_24_Update: The plugin is able to cope with empty chain name now.
  • 2012_10_22_Update: The most recent version of DSSP (v2.0.4) does not consider residues after the first TER record from the same chain. The plugin has been updated to cope with this new feature.

External links

Demonstration of DSSP plugin (pdb:1pyg).