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News & Updates Official Release PyMOL, AxPyMOL, and JyMO v1.7 have all been released] today, January 14, 2014. New Plugin Bondpack is a a collection of PyMOL plugins for easy visualization of atomic bonds. New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL. 3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards. New Plugin GROMACS_Plugin is a new plugin that ties together PyMOL and GROMACS. New Software CMPyMOL is a software that interactively visualizes 2D contact maps of proteins in PyMOL. New Script cgo_arrow draws an arrow between two picked atoms. Tips & Tricks Instructions for generating movie PDFs using .mpg movies from PyMOL. Older News See Older News.

Did you know... TCONCOORD == Description == tCONCOORD is a program that predicts conformational flexibility based on geometrical considerations. The focus is on proteins, however, most non-protein residues like ligands or other organic compounds are treated correctly. You can use it for: 1) Generating ensembles of protein structures 2) Generating alternate conformations of protein parts (e. g. loops) 3) Generating ensembles of organic compounds. The PyMOL plugin helps to setup tCONCOORD runs and provides visual support for the structure analysis in tCONCOORD. Installation 1) You need a working gromacs installation (ftp://ftp.gromacs.org/pub/gromacs/gromacs-3.3.3.tar.gz) 2) the tCONCOORD binaries (http://wwwuser.gwdg.de/~dseelig/tconcoord.html) 3) and the plugin itself (http://wwwuser.gwdg.de/~dseelig/cncplugin.html) Author Daniel Seeliger

A Random PyMOL-generated Cover. See Covers.