Inertia tensor: Difference between revisions
Jump to navigation
Jump to search
(created page for inertia_tensor.py) |
m (→Reference) |
||
| Line 28: | Line 28: | ||
A figure generated using this script can be seen in the following reference: | A figure generated using this script can be seen in the following reference: | ||
* ''Estimation of interdomain flexibility of N-terminus of factor H using residual dipolar couplings''. Maciejewski M, Tjandra N, Barlow PN. '''Biochemistry'''. | * ''Estimation of interdomain flexibility of N-terminus of factor H using residual dipolar couplings''. Maciejewski M, Tjandra N, Barlow PN. '''Biochemistry'''. 50(38) 2011, p. 8138-49, fig. 1 [http://dx.doi.org/10.1021/bi200575b doi:10.1021/bi200575b] | ||
[[Category:Script_Library]] | [[Category:Script_Library]] | ||
[[Category:UI_Scripts]] | [[Category:UI_Scripts]] | ||
Revision as of 18:58, 5 March 2013
| Type | Python Module |
|---|---|
| Download | inertia_tensor.py |
| Author(s) | Mateusz Maciejewski |
| License | MIT |
| This code has been put under version control in the project Pymol-script-repo | |
This script will draw the eigenvectors of the inertia tensor of the selected part of the molecule.
Usage
tensor selection, name, model
Examples
To draw the inertia tensor of the first model in PDB file 4B2R do:
fetch 4b2r
hide lines
show cartoon
run inertia_tensor.py
tensor 4b2r & n. n+ca+c & i. 569-611, tensor_dom11, 1
Reference
A figure generated using this script can be seen in the following reference:
- Estimation of interdomain flexibility of N-terminus of factor H using residual dipolar couplings. Maciejewski M, Tjandra N, Barlow PN. Biochemistry. 50(38) 2011, p. 8138-49, fig. 1 doi:10.1021/bi200575b