Editing OLD TOPTOC

# '''[[:Category:News|News]]'''
# '''[[:Category:FAQ|Frequently Asked Questions]]'''
# [[Gallery]] -- PyMOL Gallery and HOWTO
# '''[[:Category:Technical Issues|Technical Issues]]'''
## '''[[:Category:Installation|Installation]]'''
### [[Linux_Install|Linux]]
### [[MAC_Install|MAC]]
### [[Windows_Install|Windows]]
# '''[[:Category:Launching|Launching]]'''
## [[Launching PyMOL|Launching PyMOL]]
## [[Command_Line_Options|Command Line Options]]
## [[Launching_From_a_Script|Launching From a Script]]
# '''[[:Category:Using Pymol|Using PyMol]]'''
## [[Mouse_Controls|Mouse Controls]]
## '''[[:Category:Objects and Selections|Objects and Selections]]'''
### '''[[:Category:Working with Objects|Working with Objects]]'''
### '''[[:Category:Working with Selections|Working with Selections]]'''
### '''[[:Category:Selector_Quick_Reference|Selector Quick Reference]]'''
#### [[Single-word Selectors|Single-word Selectors]]
#### [[Property Selectors|Property Selectors]]
#### [[Selection Algebra|Selection Algebra]]
#### [[Selection Macros|Selection Macros]]
### '''[[:Category:Representations|Representations]]'''
#### [[Lines|Lines]]
#### [[Sticks|Sticks]]
#### [[Ball_and_Stick|Ball and Sticks]]
#### [[Cartoon|Cartoon]]
#### [[Surface|Surface]]
#### [[Mesh|Mesh]]
#### [[Spheres|Spheres]]
#### [[Dots|Dots]]
## '''[[:Category:Coloring|Coloring]]'''
### [[Color|Color]]
## '''[[:Category:Biochemical_Properties|Biochemical Properties]]'''
### [[Displaying Biochemical Properties|Displaying biochemical properties]]
## '''[[:Category:Stereo 3D Display|Stereo 3D Display]]''' -- wrong place
### [[Linux XFree86 Configuration]] -- wrong place
## Scenes
## Mouse Settings
## Wizards
## [[Ray_Tracing|Ray_Tracing]]
## [[Settings]] Reference
## [http://www.pymolwiki.org/index.php/Special:Search?search=movie&go=Go Movies and Animations Topics]
## ''[[:Category:Structure_Alignment|Structure Alignment]]'''
## Structure Alignment Editor
# '''[[:Category:Commands|PyMol Commands]]'''
# '''[[:Category:Advanced Issues|Advanced Issues]]'''
## [[Modeling_and_Editing_Structures|Modeling and editing structures]]
### [[Editing atoms|Editing Atoms]]
### [[Molecular Sculpting|Molecular sculpting]]
### [[Homology Modeling|Homology modeling]]
## '''[[:Category:Image Manipulation|Image Manipulation]]'''
### [[Label|Labels]]
### Photoshop/GIMP
### [[Stereo_Ray|Stereo Figures]]
### [[Publication Quality Images|Publication-quality images]]
# [[Scripting|Scripting]]
## [[Example Scripts|Example Scripts]]
## '''[[:Category:Script Library|Script Library]]'''
# '''[[:Category:Plugins|Plugins]]'''
## '''[[:Category:Electrostatics|Electrostatics and energy minimization.]]'''
### [[APBS|APBS Plugin]]
### [[Protein_contact_potential]]
## [http://www.rubor.de/bioinf/pymol_extensions.html rtools]
## [[Plugins_Tutorial|Tutorial on writing plugins]]
## '''[[:Category:Plugins Others| Others]]'''
# High-Level Applications
## Crystallography Applications
### Symmetry|Symmetry
### Electron Density
## NMR Applications
### Working with Structure Families
## '''[[:Category:Structure_Alignment|Superimposition and RMSD]]'''
### NMR Restraints and Analysis
# '''[[:Category:Third Party Software|Third Party Software]]'''
## [[PovRay|PovRay]]
## [[Making_Movies|Making Movies]]
## [[Software_Codecs|Codecs]]
## [[Surfaces_and_Voids|Surfaces and Voids]]
## [[O]]
## [[SURFNET]]
# [[Python_Integration|Python Integration]]
# '''[[:Category:PyMol_Integration|PyMol_Integration]]''' -- adding pymol to other projects (eg OpenGL Object Renderer)
## [[Nuccyl|Nuccyl]] -- Nuccyl is a great PyMol extension
## [[CASTp|CASTp]] -- Binding and Active site prediction
## [[CCTBX|CCTBX]] -- Computational Crystallography Toolbox
## [[ProMOL]]
## [[S2S]]
## '''[[:Category:PyMol_Integration Arbitrary_Graphics_Objects|Arbitrary_Graphics_Objects]]'''
# '''[[:Category:Uncategorized|Uncategorized]]''' For new pages, misplaced pages, etc.