Editing Cealign plugin (section)

===Windows systems===
====CEAlign 0.9====
This is a Win32 build of CEAlign 0.9 [http://pymolwiki.org/index.php/Cealign#Beta_Version_0.9]
=====Requirements=====
* Christoph Gohlke's latest '''unofficial''' PyMol build: http://www.lfd.uci.edu/~gohlke/#pythonlibs
* "Python 2.6.2 Windows installer" from python.org: http://www.python.org/download/
* '''CEAlign09Win32.zip''' from: http://users.umassmed.edu/shivender.shandilya/pymol/CEAlign09Win32.zip
=====Directions=====
# Download the '''CEAlign09Win32.zip''' file
# Unzip the downloaded file and follow the directions as per the included README.txt
# Enjoy the ''awesomeness'' that is CEAlign!
====CEAlign 0.8====
This is a quick and dirty method to use CEAlign 0.8 on Win32 system with the '''official''' Pymol builds...
=====Requirements=====
* Latest PyMol, installed on your system
* Numpy for python 2.4 -- quick download of just what's needed: http://users.umassmed.edu/shivender.shandilya/pymol/cealign08/numpy.zip
[Note: If this file is corrupt, you may download the latest 'Numpy for Python 2.4' directly from SourceForge.net
* Pre-compiled ccealign.pyd python module: http://users.umassmed.edu/Shivender.Shandilya/pymol/cealign08/ccealign.zip
* Modified pymolrc: http://users.umassmed.edu/Shivender.Shandilya/pymol/cealign08/pymolrc
* cealign.py and qkabsch.py from the Cealign-0.8-RBS package: download below

=====Directions=====
# Unzip the numpy.zip file, which will give you a folder named '''numpy'''
# Move this entire folder to: C:\Program Files\DeLano Scientific\PyMOL\modules\  (or the corresponding location on your system)
# Unzip ccealign.zip, which will give you a file called  '''ccealign.pyd'''
# Move this pyd file to: C:\Program Files\DeLano Scientific\PyMOL\py24\DLLs\  (or the corresponding location on your system)
# Copy the downloaded '''pymolrc''' file to: C:\Program Files\DeLano Scientific\PyMOL\   (or the corresponding location on your system)
# Extract and copy the files cealign.py and qkabsch.py from the Cealign-0.8-RBS package to: C:\Program Files\DeLano Scientific\PyMOL\py24\Lib\   (or the corresponding location on your system)
# Run PyMol and load some molecules
# Run this command in Pymol: '''cealign molecule1, molecule2'''
# Enjoy!