User:BorisKheyfets
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Emacs
Emacs is text editor in which You can easily write functions which transform text.
- Simple emacs mode for PyMOL's pml scripts
- Simple emacs mode for pdb files (I'm only interested in ATOM records)
Pygments
I use sphinx for notes of all kinds. And sphinx uses pygments to color code. So I write pygment lexers (highlight rules).
- Simple pygments lexer for PyMOL's pml scripts
- Simple pygments lexer for pdb files (I'm only interested in ATOM records)
PyMOL scripts
I do coarse grained molecular dynamics in Gromacs.