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Official Release PyMOL, AxPyMOL, and JyMO v1.7 have all been released today, January 14, 2014.
New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
New Plugin GROMACS_Plugin is a new plugin that ties together PyMOL and GROMACS.
New Software CMPyMOL is a software that interactively visualizes 2D contact maps of proteins in PyMOL.
New Script cgo_arrow draws an arrow between two picked atoms.
Tips & Tricks Instructions for generating movie PDFs using .mpg movies from PyMOL.
Older News See Older News.
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Spectrum states

Type Python Module
Download spectrum_states.py
Author(s) Takanori Nakane and Thomas Holder
License BSD-2-Clause
This code has been put under version control in the project Pymol-script-repo

Included in psico
This command or function is available from psico, which is a PyMOL extension.

Module psico.viewing

spectrum_states colors each state in a multi-state object different. Colors are along a user defined palette, just like with the spectrumany command.

Usage

spectrum_states [ selection [, representations [, color_list ]]]

Example

import spectrum_states
 
# fetch a morph from molmovdb.org
load http://molmovdb.org/uploads/284066-6299/movie.pdb.gz
 
# show ribbon in all states
as ribbon
set all_states
 
# color states from dark gray to red
spectrum_states *, ribbon, gray20 orange red

See Also

A Random PyMOL-generated Cover. See Covers.


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