Main Page

From PyMOLWiki
Jump to: navigation, search
Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
New accounts: email jason (dot) vertrees (@) gmail dot com
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) GoogleSearch
News & Updates
PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on
Official Release PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015.
New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
Older News See Older News.
Did you know...

Cartoon side chain helper

== Overview ==

set cartoon_side_chain_helper is an easy way, in cartoon mode, to only show the side chain of a residue.

For residues represented in cartoon (but not ribbon) form, if you show the residue also in stick or wireframe cartoon_side_chain_helper hides backbone atoms. Showing the sidechain in this method distorts the cartoon shape so it joins with the sidechain, effectively over-riding any cartoon_flat_cycles setting for that residue.


set cartoon_side_chain_helper, off            
set cartoon_side_chain_helper, 0              #off
set cartoon_side_chain_helper, on             
set cartoon_side_chain_helper, 1              #on


See Also


A Random PyMOL-generated Cover. See Covers.

Personal tools