Difference between revisions of "Update"
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(matchmaker argument) |
(0 and 4 different) |
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| Line 16: | Line 16: | ||
** 2: match based on ID | ** 2: match based on ID | ||
** 3: match based on rank | ** 3: match based on rank | ||
| − | ** 4: match based on index | + | ** 4: match based on index |
''Note that the meaning of matchmaker=0 differs in [[update]] and [[fit]] (also [[rms]], [[rms_Cur|rms_cur]], ...)!'' | ''Note that the meaning of matchmaker=0 differs in [[update]] and [[fit]] (also [[rms]], [[rms_Cur|rms_cur]], ...)!'' | ||
Latest revision as of 02:33, 24 January 2018
update transfers coordinates from one selection to another.
USAGE
update (target-selection),(source-selection)
PYMOL API
cmd.update( target ,source [,target_state=0 [,source_state=0 [,matchmaker=1 [,quiet=1 [,_self=cmd ]]]]]] )
ARGUMENTS
- matchmaker = integer: how to match atom pairs {default: 1}
- 0: assume that atoms are stored in the identical order
- 1: match based on all atom identifiers (segi,chain,resn,resi,name,alt)
- 2: match based on ID
- 3: match based on rank
- 4: match based on index
Note that the meaning of matchmaker=0 differs in update and fit (also rms, rms_cur, ...)!
EXAMPLES
update target,(variant)
NOTES
Currently, this applies across all pairs of states. Fine control will be added later.