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  • Great tool. I think this would be more useful for the users if they could load two objects into PyMOL and simply use it there. I had a session open with about 50 proteins and ligalign deleted everything!

Tree 09:15, 20 October 2008 (CDT)

  • Thank you for the feedback! I am always interested in making LigAlign more useful and easier to use. The current version does reinitialize the PyMOL session: LigAlign aggressively caches computations to speed up the processing, and resetting all data structures between sessions ensures that we're properly re-computing for new proteins in the new session. I'll try to make version 0.02 more judicious in what it resets. Please feel free to email with any other requests or suggestions (and feel free to send complaints and bug reports, too). Abe