Difference between revisions of "Sticks"
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| Line 1: | Line 1: | ||
= Overview = | = Overview = | ||
| − | A simple PyMol representation. Use | + | A simple PyMol representation where bonds are drawn as sticks. Use |
| − | < | + | <source lang="python"> |
| − | + | # using the show command, for some SELECTION | |
| − | </ | + | show sticks, SELECTION |
| + | |||
| + | # using the as command | ||
| + | as sticks, SELECTION | ||
| + | </source> | ||
where SELECTION is a valid selection or previously defined selection name. | where SELECTION is a valid selection or previously defined selection name. | ||
Revision as of 16:50, 28 August 2008
Overview
A simple PyMol representation where bonds are drawn as sticks. Use
# using the show command, for some SELECTION
show sticks, SELECTION
# using the as command
as sticks, SELECTION
where SELECTION is a valid selection or previously defined selection name.
Example Sticks Representation
Sticks Settings
Sticks Radius (Sticks Weight)
To change the radius for sticks, enter the following:
set stick_radius, VALUE
where
0.0<=VALUE<=1.0
- 1.0 is 100% or full radius
- 0.0 is 0% or invisible -- so use at least 0.1 or greater
- The default value is: ~0.3
Sticks Transparency
To enable transparency for sticks, enter the following:
set stick_transparency, VALUE
where 0.0<=VALUE<=1.0
- 1.0 is 100% transparent -- so invisible
- 0.0 is 0% transparent -- so opaque
Example
set stick_transparency, 0.45