Difference between revisions of "Stick radius"
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==Overview== | ==Overview== | ||
This setting affects the radius of sticks in the sticks representation. Default scale is set to 0.25. | This setting affects the radius of sticks in the sticks representation. Default scale is set to 0.25. | ||
| + | |||
| + | In newer versions of PyMOL, one may set the [[Stick_radius]] on a per-bond basis. So, you can set for example, the radius of only selected bonds if you want. This is done through the [[Set_bond]] command. | ||
<gallery> | <gallery> | ||
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==Syntax== | ==Syntax== | ||
<source lang="python"> | <source lang="python"> | ||
| − | + | set_bond stick_radius, ''size'', selection | |
</source> | </source> | ||
where, | where, | ||
*''size'' can be any float number. Using 0.25 (default value) is usually appropriate for most representations, although 0.15 migh be preferred for comparing closely related structures, e.g., conformers. | *''size'' can be any float number. Using 0.25 (default value) is usually appropriate for most representations, although 0.15 migh be preferred for comparing closely related structures, e.g., conformers. | ||
| − | ''Note:'' <source lang="python"> | + | ''Note:'' <source lang="python">set_bond stick_radius</source> by itself will revert to 1.00. |
==Related settings== | ==Related settings== | ||
| + | *[[Set_bond]] | ||
*[[sphere_scale]] | *[[sphere_scale]] | ||
*[[stick_ball_ratio]] | *[[stick_ball_ratio]] | ||
Revision as of 07:51, 25 August 2009
Overview
This setting affects the radius of sticks in the sticks representation. Default scale is set to 0.25.
In newer versions of PyMOL, one may set the Stick_radius on a per-bond basis. So, you can set for example, the radius of only selected bonds if you want. This is done through the Set_bond command.
stick_radius set to 0.05
stick_radius set to the default 0.25
stick_radius set to 0.85
Syntax
set_bond stick_radius, ''size'', selection
where,
- size can be any float number. Using 0.25 (default value) is usually appropriate for most representations, although 0.15 migh be preferred for comparing closely related structures, e.g., conformers.
Note:
set_bond stick_radius
by itself will revert to 1.00.