File list
Jump to navigation
Jump to search
This special page shows all uploaded files.
| Date | Name | Thumbnail | Size | User | Description | Versions |
|---|---|---|---|---|---|---|
| 02:29, 23 June 2020 | Flags-ignore-exfoliate.png (file) |  |
64 KB | Speleo3 | Ala-Cys with "ignore" (left) and "exfoliate" (right) flags on the CYS atoms | 1 |
| 00:24, 8 February 2020 | Annotate v pic3.jpg (file) |  |
253 KB | XinYu | example output | 1 |
| 00:11, 8 February 2020 | Annotate v pic2.jpg (file) |  |
50 KB | XinYu | Print out of the FR and CDR regions | 1 |
| 23:48, 7 February 2020 | Annotate v pic1.jpg (file) |  |
248 KB | XinYu | Create VH and VL groups. Alternatively, click-select the VH and VL sequence so that they're in the `sele` group | 1 |
| 10:28, 25 January 2020 | Ramachandran.png (file) |  |
30 KB | LucianoKagami | Ramachandran | 1 |
| 10:27, 25 January 2020 | PDF.png (file) |  |
97 KB | LucianoKagami | Probability Density Function | 1 |
| 10:26, 25 January 2020 | Pincer Angle.png (file) |  |
52 KB | LucianoKagami | Pincer Angle | 1 |
| 10:20, 25 January 2020 | Figure 4.png (file) |  |
240 KB | LucianoKagami | Free Energy Landscape | 1 |
| 13:03, 24 December 2019 | Geo measures.png (file) |  |
8 KB | LucianoKagami | 1 | |
| 01:52, 18 November 2019 | Views.png (file) |  |
188 KB | PedroLacerda | 2 | |
| 21:18, 23 August 2019 | Overlapping peptides.png (file) |  |
171 KB | Suyang | 1 | |
| 17:26, 29 January 2019 | DNA Builder5.png (file) |  |
115 KB | JarrettJohnson | 1 | |
| 17:26, 29 January 2019 | DNA Builder4.png (file) |  |
69 KB | JarrettJohnson | 1 | |
| 17:26, 29 January 2019 | DNA Builder3.png (file) |  |
39 KB | JarrettJohnson | 1 | |
| 17:26, 29 January 2019 | DNA Builder2.png (file) |  |
31 KB | JarrettJohnson | 1 | |
| 17:25, 29 January 2019 | DNA Builder1.png (file) |  |
50 KB | JarrettJohnson | 1 | |
| 12:28, 20 December 2018 | Ray trace disco factor-1-spheres.png (file) |  |
31 KB | Speleo3 | fragment indane as spheres set ray_trace_mode, 3 set ray_trace_disco_factor, 1.0 | 1 |
| 12:28, 20 December 2018 | Ray trace disco factor-0-spheres.png (file) |  |
35 KB | Speleo3 | fragment indane as spheres set ray_trace_mode, 3 set ray_trace_disco_factor, 0.0 | 1 |
| 12:27, 20 December 2018 | Ray trace disco factor-1-sticks.png (file) |  |
20 KB | Speleo3 | fragment indane as sticks set ray_trace_mode, 3 set ray_trace_disco_factor, 1.0 | 1 |
| 12:27, 20 December 2018 | Ray trace disco factor-0-sticks.png (file) |  |
23 KB | Speleo3 | fragment indane as sticks set ray_trace_mode, 3 set ray_trace_disco_factor, 0.0 | 1 |
| 12:25, 20 December 2018 | Ray trace disco factor-1-cartoon.png (file) |  |
42 KB | Speleo3 | fetch 1ubq, async=0 as cartoon set ray_trace_mode, 3 set ray_trace_disco_factor, 1.0 | 1 |
| 12:19, 20 December 2018 | Ray trace disco factor-0-cartoon.png (file) |  |
43 KB | Speleo3 | fetch 1ubq, async=0 as cartoon set ray_trace_mode, 3 set ray_trace_disco_factor, 0.0 | 1 |
| 16:42, 18 December 2018 | Fnab example.png (file) |  |
149 KB | JarrettJohnson | Example result of the fnab command. | 1 |
| 15:53, 14 December 2018 | 1rmm-atom-cartoon-transparency.png (file) |  |
218 KB | JarrettJohnson | Beta barrel showing atom-level cartoon transparency. | 1 |
| 00:04, 6 December 2018 | 4gms colors.png (file) |  |
289 KB | Jaredsampson | Prepared in response to a pymol-users thread from 11/30/2018-12/5/2018 about the appearance of transparency in a published figure. Script to reproduce: bg_color white fetch 4gms, async=0 # hemagglutinin selections select ha, chain A select l130, ha... | 1 |
| 14:12, 13 November 2018 | Designer-demo-plugin.png (file) |  |
146 KB | Speleo3 | Screenshot of Qt Designer with the demo plugin UI | 1 |
| 08:23, 13 November 2018 | Plugin manager installed.png (file) |  |
50 KB | Speleo3 | fix typo | 1 |
| 08:20, 13 November 2018 | Plugin manager settings.png (file) |  |
38 KB | Speleo3 | 1 | |
| 08:20, 13 November 2018 | Plugin manager install new.png (file) |  |
63 KB | Speleo3 | 1 | |
| 07:51, 22 October 2018 | Load brick example.png (file) |  |
45 KB | Speleo3 | volume display of an artificial map | 1 |
| 06:53, 24 July 2018 | Ramp-levels-menu.png (file) |  |
88 KB | Speleo3 | changing ramp level after APBS calculation | 1 |
| 06:46, 24 July 2018 | APBS-Electrostatics-Plugin-Options.png (file) |  |
57 KB | Speleo3 | Screenshot of the "APBS Electrostatics" plugin with all options extended. | 1 |
| 14:07, 12 June 2018 | PDBe 3b43 domains 2.png (file) |  |
79 KB | MatthewConroy | CATH domains shown in PDB entry 3b43 | 1 |
| 04:58, 8 May 2018 | Feature 4duh.PNG (file) |  |
270 KB | MarkoJukic | 1 | |
| 04:57, 8 May 2018 | Cluster analysis tab.PNG (file) |  |
102 KB | MarkoJukic | cluster analysis tab of ProBiS H2O plugin. | 1 |
| 04:54, 8 May 2018 | Define system tab.PNG (file) |  |
74 KB | MarkoJukic | define system tab of ProBiS H2O plugin | 1 |
| 04:42, 13 December 2017 | Cartoon all alt.png (file) |  |
159 KB | Speleo3 | fetch 5a0d, async=0 spectrum alt as cartoon set cartoon_all_alt | 1 |
| 06:11, 29 November 2017 | Right-click-macro.png (file) |  |
31 KB | Speleo3 | Atom right click context menu with selection macro title | 1 |
| 17:01, 21 November 2017 | Solvent-or-chain-A.png (file) |  |
337 KB | Speleo3 | fetch 1a00, async=0 color green, polymer orient as ribbon bg white set ray_shadow, 0 show spheres, solvent or chain A | 1 |
| 17:01, 21 November 2017 | Solvent-and-chain-A.png (file) |  |
231 KB | Speleo3 | fetch 1a00, async=0 color green, polymer orient as ribbon bg white set ray_shadow, 0 show spheres, solvent and chain A | 1 |
| 00:17, 26 October 2017 | Colorblindfriendly menu.png (file) |  |
42 KB | Jaredsampson | Screenshot of the color list menu added to the OpenGL GUI by the colorblindfriendly.py script in PyMOL 2.0. | 1 |
| 05:50, 19 October 2017 | Intra xfit-1nmr.png (file) |  |
174 KB | Speleo3 | fetch 1nmr, async=0 intra_xfit 1nmr, load_b=1 spectrum b, blue_white_red, guide set all_states | 1 |
| 21:31, 27 August 2017 | PluginManagerCaverPlugin301 fixed.png (file) |  |
106 KB | Cchem | 1 | |
| 08:48, 22 August 2017 | PluginManagerCaverPlugin301.jpg (file) |  |
106 KB | Speleo3 | Plugin Manager Screenshot with modified Caver Plugin | 1 |
| 07:21, 13 July 2017 | Plugin.png (file) |  |
181 KB | LukasPravda | 2 | |
| 14:03, 9 March 2017 | Surface smooth on example.png (file) |  |
49 KB | Piotr | Surface smoothing example (surface_edge_smooth=on) | 1 |
| 14:02, 9 March 2017 | Surface smooth off example.png (file) |  |
50 KB | Piotr | Surface smoothing example (surface_edge_smooth=off) | 1 |
| 17:19, 24 February 2017 | Surface carve selection.gif (file) |  |
343 KB | Speleo3 | 1 | |
| 16:21, 24 February 2017 | Surface smooth edges on.png (file) |  |
230 KB | Piotr | Example of trimmed surface with surface_smooth_edges == on | 1 |
| 16:21, 24 February 2017 | Surface smooth edges off.png (file) |  |
231 KB | Piotr | Example of trimmed surface with surface_smooth_edges == off | 1 |
