User contributions
Jump to navigation
Jump to search
- 21:36, 12 January 2010 diff hist +555 N Surface cavity mode Created page with 'Surface_cavity_mode changes how PyMOL represents cavities. <gallery heights=250px widths=300px> Image:scm0.png|surface_cavity_mode set to 0 Image:scm1.png|surface_cavity_mod…' current
- 21:35, 12 January 2010 diff hist +16 N File:Scm1.png Surface cavity 1 current
- 21:34, 12 January 2010 diff hist +16 N File:Scm0.png Surface cavity 0 current
- 00:38, 12 January 2010 diff hist +138 Main Page
- 18:02, 8 January 2010 diff hist +198 Main Page
- 11:52, 7 January 2010 diff hist +13 ConnectedCloud →The Code
- 17:16, 4 January 2010 diff hist -114 MAC Install
- 17:03, 4 January 2010 diff hist +31 Stereo 3D Display Options
- 00:46, 31 December 2009 diff hist +20 PLoS →Case 5: Interfaces (≥ intermediate)
- 00:46, 31 December 2009 diff hist +136 PLoS
- 21:23, 30 December 2009 diff hist +77 PLoS
- 02:07, 21 December 2009 diff hist +134 Ideas
- 13:21, 17 December 2009 diff hist +105 Main Page
- 13:20, 17 December 2009 diff hist +789 N Cache Created page with 'Cache manages storage of precomputed results, such as molecular surfaces. = Usage = <source lang="python"> cache action [, scenes [, state ]] </source> where, the arguments…'
- 11:54, 1 December 2009 diff hist +151 N User talk:Mglerner Created page with 'Michael, Check out Fetch_Path for a cool setting. I don't use load much now b/c of this. ~~~~'
- 10:28, 1 December 2009 diff hist +384 Cealign plugin
- 10:27, 1 December 2009 diff hist -340 Cealign plugin →Introduction
- 01:45, 30 November 2009 diff hist +85 Main Page
- 01:33, 30 November 2009 diff hist +798 N Fetch Path Created page with 'Fetch_Path sets the default path that PyMOL uses to load files from ''before'' it tries to download them from the PDB. = Details = If you have a local copy of the PDB on y…'
- 01:29, 30 November 2009 diff hist +26 Fetch
- 13:13, 29 November 2009 diff hist +354 Distance
- 13:00, 29 November 2009 diff hist +26 Get Names
- 18:05, 28 November 2009 diff hist +118 Main Page
- 09:49, 28 November 2009 diff hist +2,487 N SelInside Created page with 'selInside selects all atoms of a certain type that are located within the bounding box defined by some selection. See examples. = Usage = <source lang="python"> # find all …' current
- 10:59, 20 November 2009 diff hist +149 Main Page
- 12:28, 19 November 2009 diff hist +1 Covers →PyMOL-created Journal Covers
- 12:27, 19 November 2009 diff hist 0 Covers →PyMOL-created Journal Covers
- 12:27, 19 November 2009 diff hist +994 Covers
- 12:26, 19 November 2009 diff hist +298 N File:JBC Apr18 2008.jpg Taylor AB, Hu G, Hart PJ, and McAlister-Henn L. (2008). Allosteric motions in structures of yeast NAD+-specific isocitrate dehydrogenase. J. Biol. Chem. 283,10872-10880. http://www.ncbi.nlm.nih.gov/pubmed/18256028?ordinalpos=1&itool=EntrezSystem2.PEntrez current
- 12:25, 19 November 2009 diff hist +322 N File:ACR Jun 2007.jpg Quintanar L, Stoj C, Taylor AB, Hart PJ, Kosman DJ, and Solomon EI. (2007). Shall we dance? How a multicopper oxidase chooses its electron transfer partner. Acc. Chem. Res. 40, 445-452. http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve& current
- 12:24, 19 November 2009 diff hist +282 N File:ABB May1 2007.jpg Hu G, Taylor AB, McAlister-Henn L, and Hart PJ. (2007). Crystal structure of the yeast nicotinamidase Pnc1p. Arch. Biochem. Biophys. 461, 66-75. http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=17382284&que current
- 15:09, 18 November 2009 diff hist -36 Main Page
- 11:32, 18 November 2009 diff hist +13 Main Page
- 11:31, 18 November 2009 diff hist -197 Covers
- 11:23, 18 November 2009 diff hist +197 Covers
- 11:17, 18 November 2009 diff hist +58 Covers
- 11:16, 18 November 2009 diff hist +29 N File:CRP nature cover1.jpg CRP Cover from Simon Kolstoe. current
- 10:30, 18 November 2009 diff hist -2 Main Page
- 10:25, 18 November 2009 diff hist 0 Main Page
- 15:47, 17 November 2009 diff hist -10 Main Page
- 15:46, 17 November 2009 diff hist -17 Transform odb
- 15:46, 17 November 2009 diff hist +23 Main Page
- 14:50, 17 November 2009 diff hist +13 Ray
- 14:50, 17 November 2009 diff hist -15 Read Molstr current
- 14:50, 17 November 2009 diff hist -17 Read Pdbstr current
- 14:50, 17 November 2009 diff hist -17 Rebuild current
- 14:50, 17 November 2009 diff hist -17 Rms cur
- 14:50, 17 November 2009 diff hist -17 Rms
- 14:49, 17 November 2009 diff hist -17 Rewind current
- 14:49, 17 November 2009 diff hist -17 Reset
- 14:49, 17 November 2009 diff hist -17 Replace current
- 14:49, 17 November 2009 diff hist -17 Rename
- 14:49, 17 November 2009 diff hist -17 Remove Picked current
- 14:49, 17 November 2009 diff hist -17 Remove current
- 14:49, 17 November 2009 diff hist -17 Reinitialize
- 14:49, 17 November 2009 diff hist -17 Refresh current
- 14:49, 17 November 2009 diff hist -17 Redo
- 14:49, 17 November 2009 diff hist +9 Save
- 14:48, 17 November 2009 diff hist -17 Rock current
- 14:48, 17 November 2009 diff hist -17 Rotate
- 14:48, 17 November 2009 diff hist -17 Run
- 14:48, 17 November 2009 diff hist -17 Save
- 14:48, 17 November 2009 diff hist -18 Select
- 14:48, 17 November 2009 diff hist -13 Set current
- 14:48, 17 November 2009 diff hist -17 Set Color
- 14:48, 17 November 2009 diff hist -17 Set Dihedral
- 14:48, 17 November 2009 diff hist -17 Set Geometry current
- 14:48, 17 November 2009 diff hist -17 Set Key
- 14:48, 17 November 2009 diff hist -17 Set name
- 14:48, 17 November 2009 diff hist -17 Set Symmetry
- 14:48, 17 November 2009 diff hist -17 Set Title current
- 14:47, 17 November 2009 diff hist -17 Set View
- 14:47, 17 November 2009 diff hist -1 Show
- 14:47, 17 November 2009 diff hist -4 Show
- 14:46, 17 November 2009 diff hist +6 Show as current
- 14:46, 17 November 2009 diff hist -12 Set bond current
- 14:46, 17 November 2009 diff hist -10 Set title current
- 14:45, 17 November 2009 diff hist -17 Show as
- 14:45, 17 November 2009 diff hist -12 Smooth
- 14:45, 17 November 2009 diff hist -15 Sort
- 14:45, 17 November 2009 diff hist -12 Space current
- 14:45, 17 November 2009 diff hist -12 Splash current
- 14:45, 17 November 2009 diff hist -10 Split states
- 14:45, 17 November 2009 diff hist -16 Super
- 14:45, 17 November 2009 diff hist -19 Symexp
- 14:45, 17 November 2009 diff hist -15 Sync
- 14:45, 17 November 2009 diff hist -17 System
- 14:44, 17 November 2009 diff hist -17 Torsion current
- 14:44, 17 November 2009 diff hist -17 Translate
- 14:44, 17 November 2009 diff hist -17 Turn current
- 14:44, 17 November 2009 diff hist -13 Unbond current
- 14:44, 17 November 2009 diff hist -17 Undo
- 14:44, 17 November 2009 diff hist -17 Unmask current
- 14:44, 17 November 2009 diff hist -17 Unpick current
- 14:44, 17 November 2009 diff hist -17 Unset
- 14:44, 17 November 2009 diff hist -17 Update
- 14:44, 17 November 2009 diff hist -17 View
- 14:44, 17 November 2009 diff hist -17 Viewport
- 14:44, 17 November 2009 diff hist -17 Window
- 14:44, 17 November 2009 diff hist -17 Wizard current
- 14:44, 17 November 2009 diff hist -17 Zoom current
- 14:43, 17 November 2009 diff hist -17 Iterate State
- 14:42, 17 November 2009 diff hist -5 Iterate
- 14:42, 17 November 2009 diff hist -17 Isosurface
- 14:42, 17 November 2009 diff hist -17 Isomesh
- 14:42, 17 November 2009 diff hist -17 Isolevel
- 14:42, 17 November 2009 diff hist -17 Isodot
- 14:42, 17 November 2009 diff hist -17 Invert current
- 14:42, 17 November 2009 diff hist -17 Intra rms cur
- 14:42, 17 November 2009 diff hist -17 Intra rms
- 14:42, 17 November 2009 diff hist -17 Intra fit
- 14:42, 17 November 2009 diff hist +12 Label
- 14:41, 17 November 2009 diff hist -14 Label
- 14:40, 17 November 2009 diff hist -17 Map double
- 14:40, 17 November 2009 diff hist -17 Ls
- 14:40, 17 November 2009 diff hist -17 Load traj
- 14:40, 17 November 2009 diff hist -17 Load Model current
- 14:40, 17 November 2009 diff hist -17 Load
- 14:40, 17 November 2009 diff hist -10 Lines current
- 14:40, 17 November 2009 diff hist -17 Map Set Border
- 14:40, 17 November 2009 diff hist -14 Map Trim
- 14:40, 17 November 2009 diff hist -17 Mappend current
- 14:39, 17 November 2009 diff hist -17 Mask
- 14:39, 17 November 2009 diff hist -12 Matrix Copy
- 14:39, 17 November 2009 diff hist -17 Mclear current
- 14:39, 17 November 2009 diff hist -17 Mdo
- 14:39, 17 November 2009 diff hist -17 Mdump current
- 14:39, 17 November 2009 diff hist -17 Mem current
- 14:39, 17 November 2009 diff hist -17 Meter Reset current
- 14:39, 17 November 2009 diff hist -17 Middle current
- 14:39, 17 November 2009 diff hist -17 Mmatrix current
- 14:39, 17 November 2009 diff hist -17 Move
- 14:39, 17 November 2009 diff hist -17 Mplay current
- 14:39, 17 November 2009 diff hist -17 Mpng
- 14:38, 17 November 2009 diff hist +62 Indicate current
- 14:37, 17 November 2009 diff hist -17 Indicate
- 14:37, 17 November 2009 diff hist -17 Index current
- 14:37, 17 November 2009 diff hist -17 Identify
- 14:37, 17 November 2009 diff hist -17 Id Atom current
- 14:37, 17 November 2009 diff hist -17 Hide
- 14:37, 17 November 2009 diff hist -14 Group
- 14:37, 17 November 2009 diff hist -12 Get session
- 14:36, 17 November 2009 diff hist -12 Get chains current
- 14:36, 17 November 2009 diff hist -17 Get View
- 14:36, 17 November 2009 diff hist -18 Get Type current
- 14:36, 17 November 2009 diff hist -17 Get Version current
- 14:36, 17 November 2009 diff hist -17 Mstop current
- 14:35, 17 November 2009 diff hist -17 Mset
- 14:35, 17 November 2009 diff hist -17 Orient
- 14:35, 17 November 2009 diff hist -17 Origin
- 14:35, 17 November 2009 diff hist -17 Pair fit
- 14:35, 17 November 2009 diff hist -17 Png
- 14:35, 17 November 2009 diff hist -15 Protect
- 14:35, 17 November 2009 diff hist -17 Pseudoatom
- 14:35, 17 November 2009 diff hist -17 Push Undo current
- 14:35, 17 November 2009 diff hist -17 Pwd current
- 14:35, 17 November 2009 diff hist -17 Python
- 14:35, 17 November 2009 diff hist -17 Quit
- 14:35, 17 November 2009 diff hist -12 Ramp New
- 14:34, 17 November 2009 diff hist -20 Distance
- 14:33, 17 November 2009 diff hist -17 Enable
- 14:33, 17 November 2009 diff hist -17 Edit
- 14:33, 17 November 2009 diff hist -17 Dss
- 14:33, 17 November 2009 diff hist -1 Draw
- 14:32, 17 November 2009 diff hist -17 Draw
- 14:32, 17 November 2009 diff hist -17 Distance
- 14:32, 17 November 2009 diff hist -17 Fuse
- 14:32, 17 November 2009 diff hist -17 Full Screen current
- 14:32, 17 November 2009 diff hist -17 Frame current
- 14:32, 17 November 2009 diff hist -15 Fragment
- 14:32, 17 November 2009 diff hist -17 Forward current
- 14:32, 17 November 2009 diff hist -17 Fork
- 14:32, 17 November 2009 diff hist -12 Flag
- 14:31, 17 November 2009 diff hist -17 Fit
- 14:31, 17 November 2009 diff hist -16 Fetch
- 14:31, 17 November 2009 diff hist -15 Feedback current
- 14:31, 17 November 2009 diff hist -17 Extend
- 14:31, 17 November 2009 diff hist -17 Ending current
- 14:31, 17 November 2009 diff hist -13 Get current
- 14:30, 17 November 2009 diff hist -17 Get Angle current
- 14:30, 17 November 2009 diff hist -18 Get Dihedral
- 14:30, 17 November 2009 diff hist -17 Get Distance
- 14:30, 17 November 2009 diff hist -17 Get Extent current
- 14:30, 17 November 2009 diff hist -17 Get Model
- 14:30, 17 November 2009 diff hist -17 Get Names
- 14:30, 17 November 2009 diff hist -17 Get Pdbstr current
- 14:30, 17 November 2009 diff hist -14 Get Position
- 14:30, 17 November 2009 diff hist -17 Get Symmetry
- 14:30, 17 November 2009 diff hist -15 Get Title
- 14:29, 17 November 2009 diff hist -17 Disable
- 14:29, 17 November 2009 diff hist -17 Deselect current
- 14:29, 17 November 2009 diff hist -17 Deprotect
- 14:29, 17 November 2009 diff hist -17 Delete
- 14:29, 17 November 2009 diff hist -17 Cycle Valence
- 14:29, 17 November 2009 diff hist -17 Create
- 14:29, 17 November 2009 diff hist -17 Count States current
- 14:29, 17 November 2009 diff hist -17 Count Frames current
- 14:29, 17 November 2009 diff hist -17 Count Atoms current
- 14:28, 17 November 2009 diff hist -17 Copy
- 14:28, 17 November 2009 diff hist -16 Config Mouse current
- 14:28, 17 November 2009 diff hist -17 Color
- 14:28, 17 November 2009 diff hist -17 Cls current
- 14:27, 17 November 2009 diff hist -17 Clip current
- 14:27, 17 November 2009 diff hist -17 Center current
- 14:27, 17 November 2009 diff hist -17 Capture current
- 14:27, 17 November 2009 diff hist -14 CBC current
- 14:27, 17 November 2009 diff hist -17 Button current
- 14:27, 17 November 2009 diff hist -17 Bond current
- 14:27, 17 November 2009 diff hist -17 Bg Color current
- 14:27, 17 November 2009 diff hist -17 Backward current
- 14:27, 17 November 2009 diff hist -15 Attach
- 14:26, 17 November 2009 diff hist -17 Alter State
- 14:26, 17 November 2009 diff hist -17 Alter
- 14:25, 17 November 2009 diff hist -17 Align
- 14:25, 17 November 2009 diff hist -17 Alias current
- 14:25, 17 November 2009 diff hist -17 Abort current
- 14:22, 17 November 2009 diff hist +6 Main Page
- 13:32, 17 November 2009 diff hist +37 Main Page
- 13:28, 17 November 2009 diff hist -6 Main Page
- 13:27, 17 November 2009 diff hist 0 Main Page
- 13:27, 17 November 2009 diff hist +98 Main Page
- 13:08, 17 November 2009 diff hist +327 H Fill current
- 13:03, 17 November 2009 diff hist -5,194 Main Page
- 13:00, 17 November 2009 diff hist +23 Talk:Main Page →New Format
- 12:57, 17 November 2009 diff hist +200 Talk:Main Page →New Format
- 12:19, 17 November 2009 diff hist +3 Talk:Main Page →New Format
- 12:15, 17 November 2009 diff hist +99 Talk:Main Page →New Format
- 12:01, 17 November 2009 diff hist 0 Talk:Main Page →New Format
- 11:57, 17 November 2009 diff hist -800 Talk:Main Page →New Format
- 11:39, 17 November 2009 diff hist -22 MediaWiki:Common.css
- 11:28, 17 November 2009 diff hist -1,899 Talk:Main Page →New Format
- 11:24, 17 November 2009 diff hist +54 MediaWiki:Common.css
- 11:23, 17 November 2009 diff hist -3 MediaWiki:Common.css
- 11:22, 17 November 2009 diff hist 0 MediaWiki:Common.css
- 11:10, 17 November 2009 diff hist +594 MediaWiki:Common.css
- 12:42, 16 November 2009 diff hist +5,433 Talk:Main Page
- 13:40, 10 November 2009 diff hist +138 Warren
- 13:38, 10 November 2009 diff hist +97 Warren →Links
- 15:45, 8 November 2009 diff hist +160 Warren →User Comments
- 15:44, 8 November 2009 diff hist +217 Main Page
- 15:41, 8 November 2009 diff hist +1,923 N Warren Created page with '= Warren DeLano = Sadly, Waren DeLano, the author of PyMOL, passed away on Monday night, Nov. 2nd, 2009. He will be sorely missed. Here is the note posted to the CCP4 list by hi…'
- 15:38, 8 November 2009 diff hist +21 N File:Warren.jpg Photograph of Warren. current
- 09:25, 4 November 2009 diff hist +92 Talk:Get area
- 09:25, 4 November 2009 diff hist +321 Flag →PYMOL API
- 09:23, 4 November 2009 diff hist +1,318 N Flag Created page with '= Overview = Flag is a command to set or clear ''flags'' on atom sets. A flag is just some atom-specific property. A flag is either on or off for a residue. Possible flags ar…'
- 09:15, 4 November 2009 diff hist +325 Get area
- 10:29, 2 November 2009 diff hist +5,252 N AutoMultiFit Created page with '= OVERVIEW = AutoMultiFit will fit all given chain(s) in all given state(s) to any other given chain(s) in any other given state(s) for some given selection within a homo-oli…'
- 21:43, 22 October 2009 diff hist +149 Selection Algebra →Examples
- 21:42, 22 October 2009 diff hist +528 Selection Algebra →Examples
- 11:00, 22 October 2009 diff hist +230 Save →USAGE
- 10:58, 22 October 2009 diff hist -106 Save →NOTES
- 10:57, 22 October 2009 diff hist +74 Save →DESCRIPTION
- 19:17, 16 October 2009 diff hist +66 User:Inchoate →Cool Movies
- 19:17, 16 October 2009 diff hist +44 N File:Motions movie.mpg Movie combining motions and representations. current
- 20:17, 15 October 2009 diff hist +113 User:Inchoate →Cool Movies
- 20:16, 15 October 2009 diff hist +116 N File:Long movie ray.mpg Long movie, showing camera motions, object motions and scenes. This took longer to render than it did to make. :-) current
- 17:12, 15 October 2009 diff hist +98 User:Inchoate
- 17:09, 15 October 2009 diff hist +43 N File:Traj movie.mpg A snippet of an MD movie, made using PyMOL. current
- 15:26, 15 October 2009 diff hist +23 Talk:GoogleSearch →Boo It's Still Bad
- 12:39, 15 October 2009 diff hist +121 Main Page
- 12:39, 15 October 2009 diff hist +237 N Talk:GoogleSearch Created page with '= Feedback = Please leave comments under the following two sections depending upon your experience with the new search tool. = Yay It Worked = * It worked for my query, "movie …'
- 22:01, 14 October 2009 diff hist +104 GoogleSearch
- 22:00, 14 October 2009 diff hist -13 GoogleSearch
- 22:00, 14 October 2009 diff hist +52 Main Page
- 21:56, 14 October 2009 diff hist +26 N GoogleSearchResults moved GoogleSearchResults to GoogleSearch current
- 21:56, 14 October 2009 diff hist 0 m GoogleSearch moved GoogleSearchResults to GoogleSearch
- 21:56, 14 October 2009 diff hist -11 GoogleSearch
- 21:55, 14 October 2009 diff hist +72 GoogleSearch
- 21:52, 14 October 2009 diff hist +69 GoogleSearch
- 21:45, 14 October 2009 diff hist -1 GoogleSearch
- 18:20, 14 October 2009 diff hist -32 GoogleSearch
- 18:20, 14 October 2009 diff hist -48 GoogleSearch
- 18:19, 14 October 2009 diff hist +48 GoogleSearch
- 18:05, 14 October 2009 diff hist 0 GoogleSearch
- 18:00, 14 October 2009 diff hist +1 GoogleSearch
- 17:55, 14 October 2009 diff hist +45 N GoogleSearch Created page with 'PyMOLWiki/Google Search Results <GoogleCoop/>'
- 17:30, 14 October 2009 diff hist -27 Talk:Main Page
- 17:28, 14 October 2009 diff hist +27 Talk:Main Page
- 10:00, 14 October 2009 diff hist +42 PyMOLWiki talk:Community Portal current
- 14:22, 9 October 2009 diff hist +35 Main Page
- 14:16, 9 October 2009 diff hist +22 Space
- 18:17, 7 October 2009 diff hist +20 Main Page
- 21:52, 5 October 2009 diff hist +73 Talk:Ray current
- 15:06, 30 September 2009 diff hist -132 Super
- 12:55, 24 September 2009 diff hist +203 N Get session Created page with '= Overview = Returns a dictionary representation the currently loaded PyMOL session. = Usage = <source lang="python"> # get the session as a dictionary cmd.get_session() </sourc…'
- 10:09, 24 September 2009 diff hist +37 Get Color Indices
- 09:46, 24 September 2009 diff hist +28 Color →Expanding to Surface
- 11:36, 18 September 2009 diff hist +297 Main Page
- 11:34, 18 September 2009 diff hist +180 Talk:SuperSym
- 11:34, 18 September 2009 diff hist +219 N Talk:Autodock plugin Screenshots
- 17:55, 9 September 2009 diff hist +199 N Set title Created page with '=Overview= Sets the title of an object. =Usage= <source lang="python"> set_title objName, stateNo, newTitle # for example, set_title ligs3d, 1, This is a new title. </source> …'
- 12:27, 4 September 2009 diff hist +3 Main Page
- 11:24, 4 September 2009 diff hist -18 Main Page
- 11:20, 4 September 2009 diff hist +134 Main Page
- 11:20, 4 September 2009 diff hist +8 Main Page
- 11:14, 4 September 2009 diff hist +28 Unpick
- 14:47, 3 September 2009 diff hist +76 SuperSym
- 14:45, 3 September 2009 diff hist +53 Spectrumbar
- 15:41, 2 September 2009 diff hist 0 CollapseSel current
- 15:38, 2 September 2009 diff hist +248 CollapseSel →The Code
- 14:45, 2 September 2009 diff hist +900 m Cealign plugin →Troubleshooting
- 12:59, 2 September 2009 diff hist +217 Main Page
- 12:55, 2 September 2009 diff hist +227 CollapseSel
- 12:54, 2 September 2009 diff hist +294 Main Page
- 12:39, 2 September 2009 diff hist +1,926 N CollapseSel Created page with '= Overview = CollapseSel is a small utility function to compress strings for selections. So, if you have a selection with residues 1+2+3+4+20+21+22+100-120 this will return…'
- 11:07, 2 September 2009 diff hist +9 MAC Install →PyMOL Install from Source, Using Fink
- 11:06, 2 September 2009 diff hist +159 MAC Install →PyMOL Install from Source, Using Fink
- 19:02, 1 September 2009 diff hist +158 N Talk:SuperSym Created page with 'Wow, nice contribution. If it's this large, can you package it up in a tar/zip file for easier download? ~~~~'
- 10:54, 1 September 2009 diff hist +65 m User:Inchoate
- 10:51, 1 September 2009 diff hist +420 MAC Install →Troubleshooting
- 10:03, 1 September 2009 diff hist +25 N Movie school Redirected page to MovieSchool current
- 10:02, 1 September 2009 diff hist +3 MovieSchool current
- 09:43, 1 September 2009 diff hist 0 Cealign plugin →Mac OS X (10.5, 10.6)
- 09:43, 1 September 2009 diff hist -94 Cealign plugin →Mac OS X (10.5, 10.6)
- 09:42, 1 September 2009 diff hist +10 Cealign plugin →Mac OS X (10.5, 10.6)
- 09:42, 1 September 2009 diff hist +561 Cealign plugin →Mac OS X (10.5)
- 09:38, 1 September 2009 diff hist +1,121 MAC Install →Simplest Installation
- 09:18, 1 September 2009 diff hist +457 MAC Install →Simplest Installation
- 09:11, 1 September 2009 diff hist +69 MAC Install →Install pymol with Fink
- 17:15, 27 August 2009 diff hist +48 N Talk:Movie panel Created page with 'Need to update this page. Lots of new features.' current
- 11:41, 26 August 2009 diff hist +123 Talk:Nmr cnstr
- 13:54, 25 August 2009 diff hist +59 Talk:Cealign plugin
- 13:54, 25 August 2009 diff hist 0 Cealign plugin
- 07:53, 25 August 2009 diff hist +152 Main Page
- 07:52, 25 August 2009 diff hist +84 Set bond
- 07:51, 25 August 2009 diff hist +232 Stick radius
- 18:16, 24 August 2009 diff hist +3 Helicity check
- 22:20, 22 August 2009 diff hist +19 N User:Xiaoyuokok Created page with 'Persistent spammer.' current
- 22:43, 17 August 2009 diff hist +8 N User:Xiaoyuok0 Created page with 'Spammer.' current
- 18:35, 13 August 2009 diff hist +183 Category talk:Script Library →Requests
- 13:28, 12 August 2009 diff hist +120 Main Page
- 13:26, 12 August 2009 diff hist +30 Specular →See Also current
- 13:25, 12 August 2009 diff hist +301 Specular
- 13:24, 12 August 2009 diff hist +19 N File:Spec10.png Specular set to 10. current
- 13:23, 12 August 2009 diff hist +18 N File:Spec5.png Specular set to 5. current
- 13:23, 12 August 2009 diff hist +18 N File:Spec01.png Specular set to 1. current
- 13:22, 12 August 2009 diff hist +17 N File:Spec0.png Specular set to 0 current
- 13:20, 12 August 2009 diff hist +1,605 N Space Created page with '= OVERVIEW = Space selects a color palette (or color space). Current choices are 'RGB', 'CMYK' (usually used in printing) and, 'pymol'. Whereas computer displays use the RG…'
- 00:10, 11 August 2009 diff hist +14 N User:Mdjcccc Created page with 'Moron spammer.' current
- 15:19, 6 August 2009 diff hist +189 m Talk:Line width current
- 15:25, 5 August 2009 diff hist 0 Pseudoatom →DESCRIPTION
- 13:10, 5 August 2009 diff hist +367 Pseudoatom
- 13:09, 5 August 2009 diff hist 0 File:Pseu1.png uploaded a new version of "File:Pseu1.png" current
- 13:07, 5 August 2009 diff hist +25 N File:Pseu1.png Example using pseudoatom.
- 15:58, 31 July 2009 diff hist -1 Main Page
- 15:57, 31 July 2009 diff hist 0 Main Page
- 15:57, 31 July 2009 diff hist +143 Main Page
- 15:56, 31 July 2009 diff hist +58 CgoCircle
- 15:52, 31 July 2009 diff hist +4 CircleSelection Redirected page to CgoCircle current
- 15:52, 31 July 2009 diff hist +19 N CircleSelection Created page with '#REDIRECT cgoCircle'
- 15:48, 31 July 2009 diff hist +3,001 N CgoCircle Created page with '= Overview = This script will create a CGO circle with the origin at the specified X,Y,Z coordinates. Also, you can specify the radius and the colors. See the examples. If you…'
- 15:44, 31 July 2009 diff hist 0 N File:Circle3.png current
- 15:44, 31 July 2009 diff hist 0 N File:Circle2.png current
- 15:44, 31 July 2009 diff hist 0 N File:Circle1.png current
- 09:12, 23 July 2009 diff hist -17 Plugins Tutorial
- 12:24, 21 July 2009 diff hist +28 FindObjectsNearby
- 12:22, 21 July 2009 diff hist +32 PovRay
- 12:22, 21 July 2009 diff hist +24 Movit current
- 12:21, 21 July 2009 diff hist +24 Stereo Figures
- 12:20, 21 July 2009 diff hist +28 GetNamesInSel
- 12:20, 21 July 2009 diff hist +40 Ss current
- 12:19, 21 July 2009 diff hist +58 Transform odb.py
- 12:18, 21 July 2009 diff hist +26 Slerpy
- 11:35, 21 July 2009 diff hist +28 Removealt
- 11:34, 21 July 2009 diff hist +73 Average b
- 11:32, 21 July 2009 diff hist +24 PDB Web Services Script
- 09:38, 21 July 2009 diff hist +40 Centroid
- 19:28, 17 July 2009 diff hist +206 Talk:Cealign plugin
- 12:07, 17 July 2009 diff hist +261 Super
- 06:40, 17 July 2009 diff hist +502 Category:FAQ
- 18:45, 16 July 2009 diff hist +39 User talk:Shiven →colorByRMSD current
- 09:02, 16 July 2009 diff hist +89 m ColorByRMSD →Jason's Attempt
- 09:01, 16 July 2009 diff hist +31 Expand To Surface
- 09:00, 16 July 2009 diff hist +28 Expand To Surface
- 19:38, 15 July 2009 diff hist +69 ColorByRMSD
- 19:37, 15 July 2009 diff hist +5,421 ColorByRMSD
- 19:34, 15 July 2009 diff hist 0 N File:ColorByRMSD 1eaz 1fao.png
- 19:33, 15 July 2009 diff hist +28 N File:ColorByRMSD 1cbs 1hmt.png 1cbs vs 1hmt colored by RMSD
- 14:00, 15 July 2009 diff hist +115 Findseq
- 13:59, 15 July 2009 diff hist +230 Findseq
- 13:58, 15 July 2009 diff hist 0 N File:SeqFinder.png current
- 10:45, 15 July 2009 diff hist +2 AlphaToAll
- 22:59, 13 July 2009 diff hist +123 User talk:Shiven →colorByRMSD: new section
- 22:55, 13 July 2009 diff hist +4,729 N Talk:ColorByRMSD Created page with 'Shiven, Thanks for starting this! I took your code and then generalized and modified it. This is a step closer to being a general, working function. By that I mean, one shoul…'
- 09:19, 9 July 2009 diff hist +123 Main Page
- 09:18, 9 July 2009 diff hist +4 CGOCylinder current
- 09:18, 9 July 2009 diff hist +2,154 Nm CGOCylinder Created page with '= Overview = Category:CGO cylinders are compiled graphics cylinder objects. If you set the cylinder height to something very small, you can mimic a circle (see examples). <c…'
- 09:06, 9 July 2009 diff hist 0 N File:CylCGO.png current
- 09:01, 9 July 2009 diff hist 0 File:Cylsphere.png uploaded a new version of "File:Cylsphere.png" current
- 09:00, 9 July 2009 diff hist 0 N File:Cylsphere.png
- 19:37, 8 July 2009 diff hist +205 Category:Script Library
- 19:27, 8 July 2009 diff hist -555 Category talk:Script Library
- 19:26, 8 July 2009 diff hist +1,287 Category talk:Script Library
- 19:21, 8 July 2009 diff hist -786 Category:Script Library
- 19:19, 8 July 2009 diff hist +492 Category:Script Library
- 21:19, 7 July 2009 diff hist -218 Main Page
- 21:19, 7 July 2009 diff hist +214 User:Mazen current
- 13:51, 7 July 2009 diff hist +380 N User talk:Mazen Main Page current
- 18:23, 6 July 2009 diff hist +141 Nm User:Mazen Created page with 'Mazen, Please do not upload large animated GIFs. The SH3.gif just hammer the wiki. Thanks, ~~~~'
- 18:07, 6 July 2009 diff hist +20 User:Inchoate →My ~/.pymolrc
- 16:25, 6 July 2009 diff hist +747 N Line color Created page with '= Overview = Line_color controls per atom/bond coloring in objects or selections. [[Image:lw2.png|thumb|center|400px|Line_color changed using set_bond. (Also, line_width wa...' current
- 16:17, 6 July 2009 diff hist +23 Line width current
- 16:17, 6 July 2009 diff hist +81 Set bond
- 16:15, 6 July 2009 diff hist +188 Line width
- 16:15, 6 July 2009 diff hist 0 N File:Lw2.png current
- 16:15, 6 July 2009 diff hist 0 N File:Lw1.png current
- 16:12, 6 July 2009 diff hist +454 N Set bond Created page with '= Overview = Set_bond sets properties on bonds. This is usually some atom-connecting property like Line_width or line_color. = Syntax = <source lang="python"> # set...'
- 16:12, 6 July 2009 diff hist +405 N Line width Created page with '= Overview = Controls the width that PyMOL draws lines. = Sytnax = <source lang="python"> # set line width set line_width, value # set line_width to value for object or selecti...'
- 15:49, 6 July 2009 diff hist +179 Talk:Line width
- 15:28, 6 July 2009 diff hist +177 User:Inchoate
- 14:56, 6 July 2009 diff hist +201 Talk:Line width
- 20:33, 5 July 2009 diff hist -21 Mset →EXAMPLES
- 17:09, 2 July 2009 diff hist +8 Main Page
- 09:56, 2 July 2009 diff hist +161 Sticks →Settings current
- 09:54, 2 July 2009 diff hist +16 MovieSchool 6
- 09:53, 2 July 2009 diff hist +55 N Talk:MovieSchool 6 Created page with '* This page needs more content and OS-specific content.'
- 09:50, 2 July 2009 diff hist +218 MovieSchool 3 current
- 09:46, 2 July 2009 diff hist +74 MovieSchool →Welcome
- 09:45, 2 July 2009 diff hist +47 Main Page
- 09:43, 2 July 2009 diff hist +150 Main Page
- 08:46, 2 July 2009 diff hist +147 Main Page
- 08:41, 2 July 2009 diff hist +6 MovieSchool →Movie Making Roadmap
- 08:41, 2 July 2009 diff hist -164 MovieSchool
- 08:40, 2 July 2009 diff hist +116 MovieSchool →Welcome
- 08:39, 2 July 2009 diff hist +41 MovieSchool 1 →Real-world Example
- 08:37, 2 July 2009 diff hist +76 MovieSchool 6
- 08:36, 2 July 2009 diff hist +82 MovieSchool 5
- 08:36, 2 July 2009 diff hist +81 MovieSchool 4
- 08:35, 2 July 2009 diff hist 0 MovieSchool 3
- 08:35, 2 July 2009 diff hist +81 MovieSchool 3
- 08:34, 2 July 2009 diff hist +82 MovieSchool 2
- 08:33, 2 July 2009 diff hist +40 MovieSchool 1
- 08:32, 2 July 2009 diff hist +119 MovieSchool
- 08:12, 2 July 2009 diff hist -37,034 MovieSchool
- 08:12, 2 July 2009 diff hist +1,083 N MovieSchool 6 Created page with '== Exporting your Movie == This wiki already has lots of information on how to convert your PyMOL movie to another format. Check out those [[Software_Codecs|pa...'
- 08:11, 2 July 2009 diff hist +15,617 N MovieSchool 5 Created page with '== Putting It All Together == Now that we understand the basic PyMOL commands for movie making, we build a few ideas--which have already been hinted at--that lead to the final go...'
- 08:10, 2 July 2009 diff hist +709 MovieSchool 4
- 08:08, 2 July 2009 diff hist +3,080 N MovieSchool 3 Created page with '== Movie Making & the PyMOL GUI == These screenshots are all current as of PyMOL 1.2b8. === Basic TK GUI === [[Image:tkgui1.png|center|frame|The basic TK GUI. Menu options ...'
- 08:06, 2 July 2009 diff hist +3,080 N MovieSchool 4 Created page with '== Movie Making & the PyMOL GUI == These screenshots are all current as of PyMOL 1.2b8. === Basic TK GUI === [[Image:tkgui1.png|center|frame|The basic TK GUI. Menu options ...'
- 08:04, 2 July 2009 diff hist +1,910 MovieSchool 1
- 08:03, 2 July 2009 diff hist +11,373 N MovieSchool 2 Created page with '== Terminology == Imagine a complex movie for a moment, a movie that has camera motions, objects moving independently or in concert with other objects, changing colors and repres...'
- 08:02, 2 July 2009 diff hist +832 N MovieSchool 1 Created page with '== Movie Making == While PyMOL's capability to produce static images is quite powerful, there are some stories that are better told through movies, than static images alone. Thi...'
- 06:03, 2 July 2009 diff hist +1 Main Page
- 05:58, 2 July 2009 diff hist +128 Main Page
- 05:56, 2 July 2009 diff hist +1,552 Older News
- 05:47, 2 July 2009 diff hist -2,487 Main Page
- 05:43, 2 July 2009 diff hist -2 Main Page
- 05:42, 2 July 2009 diff hist +96 Main Page
- 17:02, 29 June 2009 diff hist +304 Talk:InterfaceResidues
- 17:00, 29 June 2009 diff hist 0 m MovieSchool →Camera & Object Motions
- 16:54, 29 June 2009 diff hist +120 MovieSchool →Camera & Object Motions
- 15:41, 29 June 2009 diff hist -1 AlphaToAll →Overview
- 15:41, 29 June 2009 diff hist +149 Main Page
- 15:40, 29 June 2009 diff hist +2,479 N AlphaToAll Created page with '= Overview = AlphaToAll will expand the alpha-carbon property that you specify to all atoms in the residues. For example, if you set the b-factor column to some different va...'
- 15:38, 29 June 2009 diff hist +41 N File:Alphac1.png Property set on all atoms in the residue. current
- 15:37, 29 June 2009 diff hist +44 N File:Alphac0.png Color property only set on the alpha carbon. current
- 14:05, 29 June 2009 diff hist +156 Main Page
- 12:32, 29 June 2009 diff hist +118 Main Page
- 12:31, 29 June 2009 diff hist +42 InterfaceResidues
- 12:31, 29 June 2009 diff hist +117 InterfaceResidues
- 12:30, 29 June 2009 diff hist +90 InterfaceResidues →Examples
- 12:30, 29 June 2009 diff hist +27 N File:1h4gi.png Interface residues in 1h4g. current
- 12:27, 29 June 2009 diff hist 0 N File:1qoxi.png current
- 11:09, 29 June 2009 diff hist +5,109 InterfaceResidues
- 16:21, 26 June 2009 diff hist +503 N InterfaceResidues Created page with '= Overview = This script finds interface residues between two proteins or chains. = Usage = <source lang="python"> interfaceResidues complexName[, chainX[, chainY ]] </source> w...'
- 23:52, 25 June 2009 diff hist -3 Label →Settings
- 17:21, 25 June 2009 diff hist +396 User:Inchoate
- 15:28, 25 June 2009 diff hist +326 MovieSchool →Zooming Around an Object
- 15:21, 25 June 2009 diff hist +1,340 MovieSchool →Movie Making for the Impatient
- 15:04, 25 June 2009 diff hist +1 MovieSchool →Motions Mode
- 15:04, 25 June 2009 diff hist +1,315 MovieSchool →openGL GUI
- 15:02, 25 June 2009 diff hist 0 N File:Glgui8.png current
- 15:02, 25 June 2009 diff hist 0 N File:Glgui7.png current
- 15:00, 25 June 2009 diff hist 0 N File:Glgui6.png current
- 15:00, 25 June 2009 diff hist 0 N File:Glgui5.png current
- 14:59, 25 June 2009 diff hist 0 N File:Glgui4.png current
- 14:51, 25 June 2009 diff hist 0 N File:Glgui3.png current
- 14:51, 25 June 2009 diff hist 0 N File:Glgui2.png current
- 14:51, 25 June 2009 diff hist 0 N File:Glgui1.png current
- 14:46, 25 June 2009 diff hist +1,723 MovieSchool →Movie Making Commands
- 14:42, 25 June 2009 diff hist 0 N File:Tkgui7.png current
- 14:41, 25 June 2009 diff hist 0 N File:Tkgui6.png current
- 14:41, 25 June 2009 diff hist 0 N File:Tkgui5.png current
- 14:39, 25 June 2009 diff hist 0 N File:Tkgui4.png current
- 14:36, 25 June 2009 diff hist 0 N File:Tkgui3.png current
- 14:34, 25 June 2009 diff hist 0 N File:Tkgui2.png current
- 14:32, 25 June 2009 diff hist 0 N File:Tkgui1.png current
- 11:06, 25 June 2009 diff hist +165 MovieSchool
- 11:04, 25 June 2009 diff hist +245 MovieSchool
- 14:30, 24 June 2009 diff hist +76 Label color current
- 14:28, 24 June 2009 diff hist 0 File:Lce.png uploaded a new version of "File:Lce.png" current
- 14:24, 24 June 2009 diff hist +23 N File:Lce.png Label coloring example.
- 14:20, 24 June 2009 diff hist +43 Label color →Syntax
- 14:16, 24 June 2009 diff hist +357 Label color
- 16:06, 23 June 2009 diff hist +161 N User:Vinnyrose Created page with 'I noticed that you are trying to do some organizing. Can you please let us know what you're trying to do & how? ~~~~' current
- 09:36, 22 June 2009 diff hist +183 Main Page
- 09:35, 22 June 2009 diff hist +747 N Texture fonts Created page with '= Overivew = Not sure exactly what this does. The reason this page exists is to let the users know that this setting can affect rendering performance in PyMOL. To test how this...' current
- 16:05, 19 June 2009 diff hist +142 Talk:MovieSchool
- 15:54, 19 June 2009 diff hist +432 Talk:MovieSchool →Updates: new section
- 15:40, 19 June 2009 diff hist +84 N Splash Created page with '= Overview = Splash, shows the PyMOL start splash screen. Category:Commands'