Difference between revisions of "Seq view gap mode"

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(created)
 
(default 1)
 
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== Values ==
 
== Values ==
  
* 0: no gap indicator display {default}
+
* 0: no gap indicator display
* 1: number of dashes equals number of missing residues (based on residue numbers)
+
* 1: number of dashes equals number of missing residues (based on residue numbers) {default}
 
* 2: one dash per gap (independent of size)
 
* 2: one dash per gap (independent of size)
 
   
 
   

Latest revision as of 05:31, 18 January 2019

The seq_view_gap_mode setting controls if gap indicators are displayed in the sequence viewer.

New in PyMOL 2.3

Values

  • 0: no gap indicator display
  • 1: number of dashes equals number of missing residues (based on residue numbers) {default}
  • 2: one dash per gap (independent of size)

Example

fetch 2xwu, type=pdb, async=0
set seq_view_gap_mode, 1
set seq_view

Scroll sequence viewer to chain B residue 152, it should display 3 dashes.

See Also