Save sep
Jump to navigation
Jump to search
The printable version is no longer supported and may have rendering errors. Please update your browser bookmarks and please use the default browser print function instead.
Description
Saves all objects as separate PDB files. Useful if you want to do things like combine separate *.pse files.
Code
from pymol import cmd
import glob
import re
def save_sep(prefix=''):
"""
save_sep <prefix>
saves multiple objects into multiple files using an optional prefix name.
e.g. save_sep prefix
"""
obj_list = cmd.get_names("all")
if obj_list:
for i in range(len(obj_list)):
obj_name = "%s%s.pdb" % (prefix, obj_list[i])
cmd.save(obj_name, obj_list[i])
print "Saving %s" % obj_name
else:
print "No objects found"
cmd.extend('save_sep',save_sep)