Difference between revisions of "PDB Index Search"

From PyMOLWiki
Jump to: navigation, search
m
 
Line 1: Line 1:
 
==Description==
 
==Description==
This plugin has been developped for PyMol v0.97. It works also with v0.98 and v0.99. This piece of software has been tested successfully on Linux, Mac OS X and Microsoft Windows.
+
 
 +
The [http://www.rcsb.org/pdb/ Protein Data Bank (PDB)] is a repository of large molecule structures (proteins and nucleic acids). The website offers also a variety of tools and resources for studying these structures. The structures are available in PDB and mmCIF format, that can be read by PyMOL. In order to exploit these resources, some plugins have been developed.
 +
 +
 
 +
This plugin has been developed for PyMol v0.97. It works also with never version of PyMOL. This piece of software has been tested successfully on Linux, Mac OS X and Microsoft Windows.
 
This plugin permits you to:
 
This plugin permits you to:
 
* search for any text into the PDB Index File ("Human Hemoglobin", i.e.)
 
* search for any text into the PDB Index File ("Human Hemoglobin", i.e.)
Line 10: Line 14:
 
==Author==
 
==Author==
 
[[User:Pansanel|Jerome Pansanel]]
 
[[User:Pansanel|Jerome Pansanel]]
 +
 +
=== See Also ===
 +
[[fetch]]
  
 
[[Category:Plugins]]
 
[[Category:Plugins]]
[[Category:Plugins_PDB]]
 

Latest revision as of 16:01, 9 September 2015

Description

The Protein Data Bank (PDB) is a repository of large molecule structures (proteins and nucleic acids). The website offers also a variety of tools and resources for studying these structures. The structures are available in PDB and mmCIF format, that can be read by PyMOL. In order to exploit these resources, some plugins have been developed.


This plugin has been developed for PyMol v0.97. It works also with never version of PyMOL. This piece of software has been tested successfully on Linux, Mac OS X and Microsoft Windows. This plugin permits you to:

  • search for any text into the PDB Index File ("Human Hemoglobin", i.e.)
  • retrieve the results into a spreadsheet. By double clicking on the row, the structure of the entry is downloaded.

Availability

This plugin is Free Software and can be downloaded on this website.

Author

Jerome Pansanel

See Also

fetch