Difference between revisions of "Nucleic Acid Sequence"
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# Enter sequence into web interface and get a pdb file back: http://structure.usc.edu/make-na/ | # Enter sequence into web interface and get a pdb file back: http://structure.usc.edu/make-na/ | ||
# Select A-DNA,B-DNA, then enter sequence into web interface and get a pdb file back: http://w3dna.rutgers.edu/rebuild/fiberch | # Select A-DNA,B-DNA, then enter sequence into web interface and get a pdb file back: http://w3dna.rutgers.edu/rebuild/fiberch | ||
| + | # Enter sequence into web interface and get a pdb file back: http://haddock.science.uu.nl/services/3DDART/ | ||
Revision as of 02:52, 22 May 2012
Building a Nucleic Acid Sequence From Hand
At the time of this writing, there is no known method by which to build nucleic acid sequences in PyMol. That being said, you can however use third party software to get the job done in PyMol.
Check out these programs:
- 3DNA
- B (aka "Biomer")
- NAMOT
- Enter sequence into web interface and get a pdb file back: http://structure.usc.edu/make-na/
- Select A-DNA,B-DNA, then enter sequence into web interface and get a pdb file back: http://w3dna.rutgers.edu/rebuild/fiberch
- Enter sequence into web interface and get a pdb file back: http://haddock.science.uu.nl/services/3DDART/