Main Page

From PyMOLWiki
Jump to: navigation, search
hosted by SBGridlogo2.jpg
Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
To request a new account, email SBGrid at: accounts (@) sbgrid dot org
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) Getting Help
News & Updates
Official Release PyMOL v2.4 has been released on May 20, 2020.
Python 3 New Python 3 compatibility guide for scripts and plugins
Official Release PyMOL v2.3 has been released on February 11, 2019.
POSF New PyMOL fellows announced for 2018-2019
Tutorial Plugins Tutorial updated for PyQt5
New Plugin ProBiS H2O is a new plugin for identification of conserved waters in protein structures.
Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
Older News See Older News.
Did you know...

Seq view format

=== OVERVIEW ===

The seq_view_format setting controls how PyMOL displays the sequence viewer. (To turn on the sequence viewer, type, set seq_view, on.) The available formats are currently:

  • 0 = Display residues as single letter amino acid names
  • 1 = Display residues as triple letter amino acid names
  • 2 = Displays all atoms in each residue based on their atom name
  • 3 = Displays each peptide chain


# usage
set seq_view_format, number

# default
set seq_view_format, 0

# triple letter amino acids
set seq_view_format, 1



A Random PyMOL-generated Cover. See Covers.