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The community-run support site for the PyMOL molecular viewer.
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News & Updates
New Plugin	LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
Official Release	PyMOL v1.8.0 has been released on Nov 18, 2015.
PyMOL Open-Source Fellowship	Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship
Official Release	PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015.
New Plugin	PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
New Plugin	Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin	MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce	PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
Older News	See Older News.

Did you know...
Intra fit intra_fit fits all states of an object to an atom selection in the specified state. It returns the rms values to python as an array. USAGE intra_fit (selection),state PYMOL API cmd.intra_fit( string selection, int state ) EXAMPLES Simple Selection intra_fit ( name ca ) Fitting NMR Ensembles Warren provided a great example on the PyMOL list. If the NMR ensemble has all the structures loaded as multiple states (which is the default behavoir (see split_states) for multimodel PDBs) then we can simply call: print cmd.intra_fit(selection, state) which will fit all of the other states to the indicated states and return the RMS values as a list. A simple example is: <source lang="python"> fetch 1i8e, async=0 print cmd.intra_fit("1i8e////CA", 1) ..→

A Random PyMOL-generated Cover. See Covers.

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