Difference between revisions of "Main Page"
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| − | . | + | __NOTOC__ |
| + | {| align="center" width="100%" style="background: #B22222; margin-bottom: 4em; border-bottom: 1px solid #B22222; border-left: 1px solid #B22222; border-right: 1px solid #B22222;" | ||
| + | |+ style="font-size: 1.0em; font-weight: normal; color: #FFFFFF; text-align:right; background: #B22222; padding-top:0.5em; padding-bottom: 0.25em; padding-right: 0.60em; border-top: 2px solid #B22222; border-bottom: 1px solid #fff;" |hosted by [[File:SBGridlogo2.jpg|140 px|link=https://sbgrid.org/]] | ||
| + | |} | ||
| + | {| align="center" style="padding-bottom: 3em;" | ||
| + | |+ style="font-size:210%; font-weight: bold; color:#000000; text-align:center; padding: 5px; margin-bottom: 4px;" | Welcome to the PyMOL Wiki! | ||
| + | |- style="text-align:center; font-weight: normal; color: #000000; font-size: 120%; font-family: sans-serif;" | ||
| + | | The community-run support site for the [http://pymol.org PyMOL] molecular viewer. | ||
| + | |- style="text-align:center; font-weight:normal; color: #000000; font-size: 120%; font-family: sans-serif;" | ||
| + | | To request a new account, email SBGrid at: accounts (@) sbgrid dot org | ||
| + | |- style="text-align:center; font-weight:bold; color: #000000; font-size: 120%; font-family: sans-serif;" | ||
| + | |} | ||
| − | . | + | {| align="center" width="45%" style="background: #FFFFFF; margin-bottom: 4em; border-bottom: 1px solid #AFB29E; border-left: 1px solid #AFB29E; border-right: 1px solid #AFB29E;" |
| + | |+ style="font-size: 1.4em; font-weight: bold; color: #FFFFFF; text-align:center; background: #000000; padding-top:0.5em; padding-bottom: 0.25em; border-top: 2px solid #000000; border-bottom: 1px solid #fff;" |Quick Links | ||
| + | |- | ||
| + | | style="font-size: 1.1em; font-weight: normal; color #48A2B4; padding: 0.5em 1em 0.5em 3em;"|'''[[:Category:Tutorials|Tutorials]]''' || '''[[TOPTOC|Table of Contents]]''' || '''[[:Category:Commands|Commands]]''' | ||
| + | |- | ||
| + | | style="font-size: 1.1em; font-weight: normal; color #48A2B4; padding: 0.5em 1em 0.5em 3em;"|'''[[:Category:Script_Library|Script Library]]''' || '''[[:Category:Plugins|Plugins]]''' || '''[[:Category:FAQ|FAQ]]''' | ||
| + | |- | ||
| + | | style="font-size: 1.1em; font-weight: normal; color #48A2B4; padding: 0.5em 1em 0.5em 3em;"|'''[[Gallery]]''' | '''[[Covers]]''' | ||
| + | ||'''[[CheatSheet|PyMOL Cheat Sheet]]''' (''[[Media:PymolRef.pdf|PDF]]'') | ||
| + | ||'''[[PyMOL_mailing_list|Getting Help]]''' | ||
| + | |} | ||
| − | . | + | {| width="100%" |
| + | | style="vertical-align: top; width: 40%" | | ||
| + | {| class="jtable" style="float: left; width: 90%;" | ||
| + | |+ style="font-size: 1.4em; font-weight: bold; text-align:left; border-bottom: 2px solid #6678b1;" | News & Updates | ||
| + | |- | ||
| + | ! Official Release | ||
| + | | [https://pymol.org PyMOL v3.0 has been released] on March 12, 2024. | ||
| + | |- | ||
| + | ! New Plugin | ||
| + | | [[CavitOmiX|CavitOmiX]] calculate [https://innophore.com Catalophore™ cavities], predict protein structures with [https://www.nvidia.com/en-us/gpu-cloud/bionemo OpenFold by NVIDIA-BioNeMo], [https://ai.facebook.com/blog/protein-folding-esmfold-metagenomics/ ESMFold] and retrieve [https://www.deepmind.com/research/highlighted-research/alphafold Alphafold] models | ||
| + | |- | ||
| + | ! Official Release | ||
| + | | [https://pymol.org PyMOL v2.5 has been released] on May 10, 2021. | ||
| + | |- | ||
| + | ! Python 3 | ||
| + | | New [[2to3|Python 3 compatibility guide]] for scripts and plugins | ||
| + | |- | ||
| + | ! POSF | ||
| + | | [https://pymol.org/fellowship New PyMOL fellowship announced for 2022-2023] | ||
| + | |- | ||
| + | ! Tutorial | ||
| + | | [[Plugins Tutorial]] updated for PyQt5 | ||
| + | |- | ||
| + | ! New Plugin | ||
| + | | [[PICv|PICv]] is a new plugin for clustering protein-protein interactions and visualization with available data from PDBe | ||
| + | |- | ||
| + | ! Selection keywords | ||
| + | | New [[Selection Algebra|polymer.protein and polymer.nucleic]] selection keywords. Thanks everyone who participated in the [https://goo.gl/forms/r0Ck03VTytZQxN4A2 poll]! | ||
| + | |- | ||
| + | ! Plugin Update | ||
| + | | [[MOLE 2.0: advanced approach for analysis of biomacromolecular channels|MOLE 2.5]] is an updated version of channel analysis software in PyMOL | ||
| + | |- | ||
| + | ! New Script | ||
| + | | [[dssr_block]] is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons | ||
| + | |- | ||
| + | ! Older News | ||
| + | | See [[Older_News|Older News]]. | ||
| + | |} | ||
| + | |style="vertical-align: top; width: 40%"| | ||
| + | {| class="jtable" style="float: right; width: 90%" | ||
| + | |+ style="font-size: 1.4em; font-weight: bold; text-align:left; border-bottom: 2px solid #6678b1;" |Did you know... | ||
| + | |- | ||
| + | |<div class="didyouknow" > | ||
| + | <DynamicPageList> | ||
| + | randomcount=1 | ||
| + | category=Commands|Plugins|Script_Library|Settings | ||
| + | includepage=* | ||
| + | includemaxlength=1050 | ||
| + | escapelinks=false | ||
| + | allowcachedresults=false | ||
| + | resultsheader=__NOTOC__ __NOEDITSECTION__ | ||
| + | listseparators=,<h3>[[%PAGE%]]</h3>,,\n | ||
| + | </DynamicPageList> | ||
| + | </div> | ||
| + | <div style="clear: both;"></div> | ||
| + | |} | ||
| + | | | ||
| + | |style="vertical-align: top; width: 18%"| | ||
| + | <DynamicPageList> | ||
| + | imagecontainer=Covers | ||
| + | randomcount=1 | ||
| + | escapelinks=false | ||
| + | openreferences=true | ||
| + | listseparators=[[,%PAGE%,|thumb|185px|A Random PyMOL-generated Cover. See [[Covers]].]],\n | ||
| + | ordermethod=none | ||
| + | allowcachedresults=false | ||
| + | </DynamicPageList> | ||
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Latest revision as of 12:54, 12 March 2024
| The community-run support site for the PyMOL molecular viewer. |
| To request a new account, email SBGrid at: accounts (@) sbgrid dot org |
| Tutorials | Table of Contents | Commands |
| Script Library | Plugins | FAQ |
| Gallery | Covers | PyMOL Cheat Sheet (PDF) | Getting Help |
|
|
 A Random PyMOL-generated Cover. See Covers.
|