Difference between revisions of "Main Page"

Revision as of 05:27, 19 February 2019

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Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
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Quick Links
Tutorials	Table of Contents	Commands
Script Library	Plugins	FAQ
Gallery \| Covers	PyMOL Cheat Sheet (PDF)	Getting Help

News & Updates
Python 3	New Python 3 compatibility guide for scripts and plugins
Official Release	PyMOL v2.3 has been released on February 11, 2019.
POSF	New PyMOL fellows announced for 2018-2019
Tutorial	Plugins Tutorial updated for PyQt5
New Plugin	ProBiS H2O is a new plugin for identification of conserved waters in protein structures.
Selection keywords	New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
Plugin Update	MOLE 2.5 is an updated version of channel analysis software in PyMOL
New Script	dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
Older News	See Older News.

Did you know...
Get View get_view returns and optionally prints out the current view information in a format which can be embedded into a command script and can be used in subsequent calls to set_view. If a log file is currently open, get_view will not write the view matrix to the screen unless the "output" parameter is 2. This command is very useful for saving the orientation of a scene for later. Authors of molecular movies may find this command very powerful. USAGE get_view PYMOL API cmd.get_view(output=1, quiet=1) my_view = cmd.get_view() output control: 0 = output matrix to screen 1 = don't output matrix to screen 2 = force output to screen even if log file is open 3 = return formatted string instead of a list API USAGE cmd.get_view(0) # zero option suppresses output (LEGACY approach) cmd.get_view(quiet=1) # suppresses output using PyMOL's normal "quiet" parameter. NOTES Contents of the view matrix 0 - 8 = column-major 3x3 matrix ..→

A Random PyMOL-generated Cover. See Covers.

@@ Line 28: / Line 28: @@
 {| class="jtable" style="float: left; width: 90%;"
 |+ style="font-size: 1.4em; font-weight: bold; text-align:left; border-bottom: 2px solid #6678b1;" | News &amp; Updates
+|-
+! Python 3
+| New [[2to3|Python 3 compatibility guide]] for scripts and plugins
 |-
 ! Official Release
-| [https://pymol.org PyMOL v2.2 has been released] on July 24, 2018.
+| [https://pymol.org PyMOL v2.3 has been released] on February 11, 2019.
 |-
 ! POSF
-| [https://pymol.org/fellowship PyMOL Open-Source Fellowship program] accepting applications for 2018-2019
+| [https://pymol.org/fellowship New PyMOL fellows announced for 2018-2019]
+|-
+! Tutorial
+| [[Plugins Tutorial]] updated for PyQt5
 |-
 ! New Plugin
@@ Line 46: / Line 52: @@
 ! New Script
 | [[dssr_block]] is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
-|-
-! New Plugin
-| [[Lisica|LiSiCA]] is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
-|-
-! New Plugin
-| [[PyANM|PyANM]] is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
-|-
-! New Plugin
-| [[Bondpack]] is a collection of PyMOL plugins for easy visualization of atomic bonds.
-|-
-! New Plugin
-| [[MOLE 2.0: advanced approach for analysis of biomacromolecular channels|MOLE 2.0]] is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
-|-
-! 3D using Geforce
-| PyMOL can now be [http://forums.geforce.com/default/topic/571604/3d-vision/3d-vision-working-with-qbs-in-opengl-software-using-geforce/2/ visualized in 3D using Nvidia GeForce video cards] (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
 |-
 ! Older News

Difference between revisions of "Main Page"

Revision as of 05:27, 19 February 2019

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