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News & Updates Official Release PyMOL v2.1 has been released on March 13, 2018. Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll! Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm. New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL. New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds. New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL. 3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards. Older News See Older News.

Did you know... Cyspka Type Python Script Download cyspka.py Author(s) Troels E. Linnet License BSD This code has been put under version control in the project Pymol-script-repo Introduction This script is an experimental surface cysteine pKa predictor. The script is solely based on the work by: Predicting Reactivities of Protein Surface Cysteines as Part of a Strategy for Selective Multiple Labeling. Maik H. Jacob, Dan Amir, Vladimir Ratner, Eugene Gussakowsky, and Elisha Haas. Biochemistry. Vol 44, p. 13664-13672, doi:10.1021/bi051205t Questions to the article should be send to Maik Jacob. Overview The authors Jacob et al. were able to describe a computational algorithm that could predict the reactivity of surface cysteines. The algorithm was based on reaction rates with Ellmans reagent, Riddles et al., on 26 single cysteine mutants of adenylate kinase. The authors could predict the reactivity of the cysteines ..→

A Random PyMOL-generated Cover. See Covers.