Difference between revisions of "Main Page"
Jump to navigation
Jump to search
(PyMOL v2.0) |
|||
(47 intermediate revisions by 10 users not shown) | |||
Line 1: | Line 1: | ||
__NOTOC__ | __NOTOC__ | ||
− | {| align="center" style="padding-bottom: | + | {| align="center" width="100%" style="background: #B22222; margin-bottom: 4em; border-bottom: 1px solid #B22222; border-left: 1px solid #B22222; border-right: 1px solid #B22222;" |
− | |+ style="font-size:210%; font-weight: bold; color:# | + | |+ style="font-size: 1.0em; font-weight: normal; color: #FFFFFF; text-align:right; background: #B22222; padding-top:0.5em; padding-bottom: 0.25em; padding-right: 0.60em; border-top: 2px solid #B22222; border-bottom: 1px solid #fff;" |hosted by [[File:SBGridlogo2.jpg|140 px|link=https://sbgrid.org/]] |
− | |- style="text-align:center; font-weight: | + | |} |
+ | {| align="center" style="padding-bottom: 3em;" | ||
+ | |+ style="font-size:210%; font-weight: bold; color:#000000; text-align:center; padding: 5px; margin-bottom: 4px;" | Welcome to the PyMOL Wiki! | ||
+ | |- style="text-align:center; font-weight: normal; color: #000000; font-size: 120%; font-family: sans-serif;" | ||
| The community-run support site for the [http://pymol.org PyMOL] molecular viewer. | | The community-run support site for the [http://pymol.org PyMOL] molecular viewer. | ||
− | |- style="text-align:center; font-weight: | + | |- style="text-align:center; font-weight:normal; color: #000000; font-size: 120%; font-family: sans-serif;" |
− | | | + | | To request a new account, email SBGrid at: accounts (@) sbgrid dot org |
− | |- style="text-align:center; font-weight:bold; color: # | + | |- style="text-align:center; font-weight:bold; color: #000000; font-size: 120%; font-family: sans-serif;" |
|} | |} | ||
− | {| align="center" width="45%" style="background: # | + | |
− | |+ style="font-size: 1.4em; font-weight: bold; color: # | + | {| align="center" width="45%" style="background: #FFFFFF; margin-bottom: 4em; border-bottom: 1px solid #AFB29E; border-left: 1px solid #AFB29E; border-right: 1px solid #AFB29E;" |
+ | |+ style="font-size: 1.4em; font-weight: bold; color: #FFFFFF; text-align:center; background: #000000; padding-top:0.5em; padding-bottom: 0.25em; border-top: 2px solid #000000; border-bottom: 1px solid #fff;" |Quick Links | ||
|- | |- | ||
− | | style="font-size: 1.1em; color # | + | | style="font-size: 1.1em; font-weight: normal; color #48A2B4; padding: 0.5em 1em 0.5em 3em;"|'''[[:Category:Tutorials|Tutorials]]''' || '''[[TOPTOC|Table of Contents]]''' || '''[[:Category:Commands|Commands]]''' |
|- | |- | ||
− | | style="font-size: 1.1em; color # | + | | style="font-size: 1.1em; font-weight: normal; color #48A2B4; padding: 0.5em 1em 0.5em 3em;"|'''[[:Category:Script_Library|Script Library]]''' || '''[[:Category:Plugins|Plugins]]''' || '''[[:Category:FAQ|FAQ]]''' |
|- | |- | ||
− | | style="font-size: 1.1em; color # | + | | style="font-size: 1.1em; font-weight: normal; color #48A2B4; padding: 0.5em 1em 0.5em 3em;"|'''[[Gallery]]''' | '''[[Covers]]''' |
||'''[[CheatSheet|PyMOL Cheat Sheet]]''' (''[[Media:PymolRef.pdf|PDF]]'') | ||'''[[CheatSheet|PyMOL Cheat Sheet]]''' (''[[Media:PymolRef.pdf|PDF]]'') | ||
− | ||'''[[ | + | ||'''[[PyMOL_mailing_list|Getting Help]]''' |
|} | |} | ||
Line 25: | Line 29: | ||
|+ style="font-size: 1.4em; font-weight: bold; text-align:left; border-bottom: 2px solid #6678b1;" | News & Updates | |+ style="font-size: 1.4em; font-weight: bold; text-align:left; border-bottom: 2px solid #6678b1;" | News & Updates | ||
|- | |- | ||
− | + | ! Official Release | |
− | ! | + | | [https://pymol.org PyMOL v2.0 has been released] on September 20, 2017. |
− | | | ||
|- | |- | ||
− | + | ! Plugin Update | |
− | ! | + | | [[MOLE 2.0: advanced approach for analysis of biomacromolecular channels|MOLE 2.5]] is an updated version of channel analysis software in PyMOL |
− | | [[ | ||
|- | |- | ||
− | ! | + | ! Official Release |
− | | [ | + | | [http://pymol.org PyMOL v1.8.6 has been released] on March 9, 2017. |
|- | |- | ||
− | ! | + | ! Official Release |
− | | [ | + | | [http://pymol.org PyMOL v1.8.4 has been released] on October 4, 2016. |
|- | |- | ||
! New Script | ! New Script | ||
− | | [[ | + | | [[dssr_block]] is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons |
|- | |- | ||
! New Plugin | ! New Plugin | ||
− | | [[ | + | | [[Lisica|LiSiCA]] is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm. |
|- | |- | ||
− | ! | + | ! Official Release |
− | | [ | + | | [http://pymol.org PyMOL v1.8.0 has been released] on Nov 18, 2015. |
|- | |- | ||
− | ! | + | ! PyMOL Open-Source Fellowship |
− | | | + | | Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship |
|- | |- | ||
− | ! | + | ! Official Release |
− | | [ | + | | [http://pymol.org PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released] on May 4, 2015. |
|- | |- | ||
− | ! New | + | ! New Plugin |
− | | [[ | + | | [[PyANM|PyANM]] is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL. |
|- | |- | ||
! New Plugin | ! New Plugin | ||
− | | [[ | + | | [[Bondpack]] is a collection of PyMOL plugins for easy visualization of atomic bonds. |
|- | |- | ||
− | ! New | + | ! New Plugin |
− | | [[ | + | | [[MOLE 2.0: advanced approach for analysis of biomacromolecular channels|MOLE 2.0]] is a new plugin for rapid analysis of biomacromolecular channels in PyMOL. |
− | |||
− | |||
− | | | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
|- | |- | ||
− | ! | + | ! 3D using Geforce |
− | + | | PyMOL can now be [http://forums.geforce.com/default/topic/571604/3d-vision/3d-vision-working-with-qbs-in-opengl-software-using-geforce/2/ visualized in 3D using Nvidia GeForce video cards] (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards. | |
− | | | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
|- | |- | ||
! Older News | ! Older News | ||
Line 98: | Line 76: | ||
|- | |- | ||
|<div class="didyouknow" > | |<div class="didyouknow" > | ||
− | < | + | <DynamicPageList> |
− | + | randomcount=1 | |
category=Commands|Plugins|Script_Library|Settings | category=Commands|Plugins|Script_Library|Settings | ||
includepage=* | includepage=* | ||
− | includemaxlength= | + | includemaxlength=1050 |
escapelinks=false | escapelinks=false | ||
+ | allowcachedresults=false | ||
resultsheader=__NOTOC__ __NOEDITSECTION__ | resultsheader=__NOTOC__ __NOEDITSECTION__ | ||
− | |||
− | |||
− | |||
listseparators=,<h3>[[%PAGE%]]</h3>,,\n | listseparators=,<h3>[[%PAGE%]]</h3>,,\n | ||
− | </ | + | </DynamicPageList> |
</div> | </div> | ||
<div style="clear: both;"></div> | <div style="clear: both;"></div> | ||
Line 115: | Line 91: | ||
| | | | ||
|style="vertical-align: top; width: 18%"| | |style="vertical-align: top; width: 18%"| | ||
− | < | + | <DynamicPageList> |
imagecontainer=Covers | imagecontainer=Covers | ||
randomcount=1 | randomcount=1 | ||
Line 122: | Line 98: | ||
listseparators=[[,%PAGE%,|thumb|185px|A Random PyMOL-generated Cover. See [[Covers]].]],\n | listseparators=[[,%PAGE%,|thumb|185px|A Random PyMOL-generated Cover. See [[Covers]].]],\n | ||
ordermethod=none | ordermethod=none | ||
− | </ | + | allowcachedresults=false |
+ | </DynamicPageList> | ||
|} | |} |
Revision as of 14:20, 20 September 2017
The community-run support site for the PyMOL molecular viewer. |
To request a new account, email SBGrid at: accounts (@) sbgrid dot org |
Tutorials | Table of Contents | Commands |
Script Library | Plugins | FAQ |
Gallery | Covers | PyMOL Cheat Sheet (PDF) | Getting Help |
|
|
|