Difference between revisions of "Intra rms cur"

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===DESCRIPTION===
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    "intra_rms_cur" calculates rms values for all states of an object
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'''intra_rms_cur''' calculates rms values for all states of an object over an atom selection relative to the indicated state without performing any fitting.  The rms values are returned as a python array.
  over an atom selection relative to the indicated state without
 
  performing any fitting.  The rms values are returned
 
  as a python array.
 
 
   
 
   
 
===PYMOL API===
 
===PYMOL API===
    cmd.intra_rms_cur( string selection, int state)
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<source lang="python">
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cmd.intra_rms_cur( string selection, int state)
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</source>
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===PYTHON EXAMPLE===
 
===PYTHON EXAMPLE===
 
<source lang="python">
 
<source lang="python">
  from pymol import cmd
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from pymol import cmd
  rms = cmd.intra_rms_cur("(name ca)",1)
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rms = cmd.intra_rms_cur("(name ca)",1)
 
</source>
 
</source>
  
 
===USER EXAMPLES/COMMENTS===
 
===USER EXAMPLES/COMMENTS===
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See [[Rms]] for selection caveats for this group of commands.
 +
 
 
===SEE ALSO===
 
===SEE ALSO===
    [[Cmd fit]], [[Cmd rms]], [[Cmd rms_cur]], [[Cmd intra_fit]], [[Cmd intra_rms]], [[Cmd pair_fit]]
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[[Fit]], [[Rms]], [[Rms_Cur]], [[Intra_Fit]], [[Intra_Rms]], [[Pair_Fit]]  
 
  
[[Category:Commands|intra_rms_cur]]
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[[Category:Commands|Intra Rms Cur]]
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[[Category:States|Intra Rms Cur]]
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[[Category:Structure_Alignment|Intra Rms Cur]]

Latest revision as of 05:52, 20 November 2013

intra_rms_cur calculates rms values for all states of an object over an atom selection relative to the indicated state without performing any fitting. The rms values are returned as a python array.

PYMOL API

cmd.intra_rms_cur( string selection, int state)

PYTHON EXAMPLE

from pymol import cmd
rms = cmd.intra_rms_cur("(name ca)",1)

USER EXAMPLES/COMMENTS

See Rms for selection caveats for this group of commands.

SEE ALSO

Fit, Rms, Rms_Cur, Intra_Fit, Intra_Rms, Pair_Fit