Difference between revisions of "Intra fit"
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===DESCRIPTION=== | ===DESCRIPTION=== | ||
| − | + | '''intra_fit''' fits all states of an object to an atom selection in the specified state. It returns the rms values to python as an array. | |
| − | + | ||
===USAGE=== | ===USAGE=== | ||
intra_fit (selection),state | intra_fit (selection),state | ||
| − | + | ||
===PYMOL API=== | ===PYMOL API=== | ||
<source lang="python"> | <source lang="python"> | ||
| − | + | cmd.intra_fit( string selection, int state ) | |
</source> | </source> | ||
| − | + | ||
===EXAMPLES=== | ===EXAMPLES=== | ||
intra_fit ( name ca ) | intra_fit ( name ca ) | ||
| Line 15: | Line 15: | ||
===PYTHON EXAMPLE=== | ===PYTHON EXAMPLE=== | ||
<source lang="python"> | <source lang="python"> | ||
| − | + | from pymol import cmd | |
| − | + | rms = cmd.intra_fit("(name ca)",1) | |
</source> | </source> | ||
| Line 25: | Line 25: | ||
===SEE ALSO=== | ===SEE ALSO=== | ||
| − | + | [[Fit]], [[Rms]], [[Rms_Cur]], [[Intra_Rms]], [[Intra_Rms_Cur]], [[Pair_Fit]] | |
[[Category:Commands|intra_fit]] | [[Category:Commands|intra_fit]] | ||
Revision as of 23:29, 2 June 2005
DESCRIPTION
intra_fit fits all states of an object to an atom selection in the specified state. It returns the rms values to python as an array.
USAGE
intra_fit (selection),state
PYMOL API
cmd.intra_fit( string selection, int state )
EXAMPLES
intra_fit ( name ca )
PYTHON EXAMPLE
from pymol import cmd
rms = cmd.intra_fit("(name ca)",1)
USER EXAMPLES
USER COMMENTS
See Intra_Rms for selection caveats for this group of commands.