Homology Modeling

From PyMOLWiki
Revision as of 16:00, 6 May 2005 by Inchoate (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Align proteins with CA fit

If the proteins have significant homology, then you can use the align command:

align prot1////ca,prot2

which will perform a sequence alignment of prot1 against prot2, and then an optimizing fit using the CA positions.