Difference between revisions of "Get fastastr"
Jump to navigation
Jump to search
(per chain) |
(Nucleic acid support) |
||
| Line 2: | Line 2: | ||
''Changed in PyMOL 2.2: Sequences per chain'' | ''Changed in PyMOL 2.2: Sequences per chain'' | ||
| + | |||
| + | ''Changed in PyMOL 2.2: Nucleic acid support'' | ||
== PyMOL API == | == PyMOL API == | ||
Latest revision as of 13:49, 30 July 2020
get_fastastr is an API-only function which returns the one-letter amino acid sequence in FASTA format.
Changed in PyMOL 2.2: Sequences per chain
Changed in PyMOL 2.2: Nucleic acid support
PyMOL API
cmd.get_fastastr(string selection='all', int state=-1, int quiet=1)
Example
fetch 1ubq, async=0
print(cmd.get_fastastr('all'))
>1ubq MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV LRLRGG