Difference between revisions of "Get Coordinates I"
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| Line 13: | Line 13: | ||
cmd.update("pept","tmp") | cmd.update("pept","tmp") | ||
cmd.delete("tmp") | cmd.delete("tmp") | ||
| + | </source> | ||
| + | |||
| + | The same result can be achieved also like this: | ||
| + | |||
| + | <source lang="python"> | ||
| + | alter_state 1, pept, (x,y,z) = (-y,x,z) | ||
| + | </source> | ||
| + | |||
| + | or like this: | ||
| + | |||
| + | <source lang="python"> | ||
| + | rotate z, 90, pept, camera=0, origin=[0,0,0] | ||
</source> | </source> | ||
[[Category:Script_Library|Get Coordinates I]] | [[Category:Script_Library|Get Coordinates I]] | ||
[[Category:ObjSel_Scripts]] | [[Category:ObjSel_Scripts]] | ||
Revision as of 12:28, 10 April 2011
# This script gets a copy of the coordinates in Python,
# rotates the object about the Z axis, and then
# updates the coordinates in the original object.
from pymol import cmd
model = cmd.get_model("pept")
for a in model.atom:
a.coord=[ -a.coord[1], a.coord[0], a.coord[2]]
cmd.load_model(model,"tmp")
cmd.update("pept","tmp")
cmd.delete("tmp")
The same result can be achieved also like this:
alter_state 1, pept, (x,y,z) = (-y,x,z)
or like this:
rotate z, 90, pept, camera=0, origin=[0,0,0]