Difference between revisions of "Covers"
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<!-- Please consider using the following format: Image:filename.jpg|Brief description of the image (not necessarily the article title). [http://www.journal.org/url-to-issue-table-of-contents ''Journal'', Volume 338, Issue 6112, 7 Dec 2012]. --> | <!-- Please consider using the following format: Image:filename.jpg|Brief description of the image (not necessarily the article title). [http://www.journal.org/url-to-issue-table-of-contents ''Journal'', Volume 338, Issue 6112, 7 Dec 2012]. --> | ||
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| + | <!-- 2021 --> | ||
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| + | Image:Rsif.2020.18.issue-174.jpg|'''An elastic network model of the SARS-CoV-2 main protease with N3 inhibitor.'''. [https://doi.org/10.1098/rsif.2020.0591 ''J R Soc Interface'', Volume 18, Issue 174, 6 Jan 2021]. | ||
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| + | <!-- 2015 --> | ||
| + | Image:Jctcce v011i009.jpg|'''How Molecular Conformational Changes Affect Changes in Free Energy''' [http://pubs.acs.org/doi/abs/10.1021/acs.jctc.5b00235 ''J. Chem. Theory Comput.'', Volume 11, Number 7, June 2015]. | ||
| + | Image:Nucl._Acids_Res.-2015-Front-Matter_DBissue.jpg|'''ValidatorDB: database of up-to-date validation results for ligands and non-standard residues from the Protein Data Bank''' [https://doi.org/10.1093/nar/gku1118 ''Nucl Acids Res'', Volume 43, Issue D1, January 2015]. | ||
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| + | <!-- 2014 --> | ||
| + | Image:Hdgyp_cover.jpg|'''Structure of P. maritima HDGYP domain showing a novel tri-iron catalytic centre''' [http://onlinelibrary.wiley.com/doi/10.1111/mmi.12494/abstract ''Molecular Microbiology'', Volume 91, Number 1, January 2014]. | ||
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Latest revision as of 03:18, 27 January 2022
PyMOL-created Journal Covers
Part of PyMOL's popularity comes from the fact that it is very flexible and it offers arbitrarily high-resolution images as output; this make it a great tool for making journal covers or any press-related images.
Here are some of the known PyMOL-created Journal Covers. There are surely more out there. If you have a cover you'd like to add, feel free.
An elastic network model of the SARS-CoV-2 main protease with N3 inhibitor.. J R Soc Interface, Volume 18, Issue 174, 6 Jan 2021.
How Molecular Conformational Changes Affect Changes in Free Energy J. Chem. Theory Comput., Volume 11, Number 7, June 2015.
ValidatorDB: database of up-to-date validation results for ligands and non-standard residues from the Protein Data Bank Nucl Acids Res, Volume 43, Issue D1, January 2015.
Structure of P. maritima HDGYP domain showing a novel tri-iron catalytic centre Molecular Microbiology, Volume 91, Number 1, January 2014.
Protection and Deprotection of DNA — High-Temperature Stability of Nucleic Acid Barcodes for Polymer Labeling Angewandte Chemie International Edition, Volume 52, Issue 15, 8 April 2013.
A dynamic model of long-range conformational adaptations triggered by nucleotide binding in GroEL-GroES Proteins, Volume 80, Issue 10, 2012.
Protein Science, Vol. 20, No. 12, Dec 2011
Journal of Polymer Science, Nov 15 2011
Biophysical Journal, Aug 3 2011
Focused Evolution of HIV-1 Neutralizing Antibodies Revealed by Structures and Deep Sequencing, [Science, Sept. 16, 2011].
Deconstructing honeybee vitellogenin J. Exp. Biol., Volume 214, Issue 4, 2011.
Binding of 14-3-3g to membranes FEBS lett., Volume 585, Issue 8, 2011.
Image of two short stretches of double-stranded DNA linked by a ruthenium 'light-switch complex', October 25, 2011; 108 (43) [[1]]
PI3K Inhibitors C&EN, April 11, 2011.
Microbiology of article entitled "Genetic mapping of the interface between the ArsD metallochaperone and the ArsA ATPase. Volume 79, Feb, 2011, Molecular Microbiology
Human antibodies coded by the VH3 gene and specific for V3 crown of the HIV-1 gp120 have an antigen-binding site shaped like a soup ladle. Structure, Volume 17, Issue 11, 11 Nov 2009.
X-ray structure, symmetry and mechanism of an AMPA-subtype glutamate receptor Nature
Impact of rRNA methylations on ribosome recycling and fidelity of initiation in Escherichia coli. Molecular Microbiology
Crystal structure of the catalytic domain of the mitotic checkpoint kinase Mps1 in complex with SP600125. Chu ML, Chavas LM, Douglas KT, Eyers PA, Tabernero L. J Biol Chem. 2008 Aug 1;283(31):21495-500. Epub 2008 May 14.
Allosteric motions in structures of yeast NAD-specific isocitrate dehydrogenase. J. Biol. Chem.
Shall we dance? How a multicopper oxidase chooses its electron transfer partner. Acc. Chem. Res.
Crystal structure of the yeast nicotinamidase Pnc1p. Arch. Biochem. Biophys.
FLT3 Activation by an Oncogenic Insertion Molecular Cell, Volume 13 Number 2, January 30, 2004.
End-on view of the atomic model of the bacterial actinlike ParM protein double-helical filament, generated from an electron microscopic reconstruction. A Bipolar Spindle of Antiparallel ParM Filaments Drives Bacterial Plasmid Segregation.
Crystal Structure of the Class D beta-lactamase OXA-1 in complex with doripenem Biochemistry
MD simulation of protein-protein binding Pymol generated Movie is avialable inside pdf[[2]] or high quality AVI format[3]
Targeting DNA, BIOCHEMIE, July 1, 2008 Cover, Vol. 90.
Harnessing Helices, Chemical & Engineering News, June 2, 2008 Cover, Vol. 86, Issue 22.
Fusarium head blight (FHB), JBC, January 18, 2008 Cover, Vol. 283, Issue 3.
Pumping Ions, Nature, Dec. 13th, 2007.
[4], Dec 2007.
Science, Nov. 23rd, 2007.
Sensing Calciums[5], Nov 20th, 2007.
Aminoacyl-tRNA synthetases from human mitochondria[6], Nov. 13th, 2007.
Science, Oct. 19th, 2007.
Sensing Acid, Nature, Sept. 20th, 2007.
Form Finds Function?, Nature, Aug. 16thm 2007.
Nature Neuroscience Vol. 10 No. 8 Aug. 2007
Paused transcription complexes, Molecular Cell, August 3 2007 Cover, Vol. 27, Issue 3.
Vitamin D, ABB, April 14 2007 Cover, Vol. 460, Issue 2.
Mycobacterium tuberculosis PknD dimerization JBC, April 13 2007 Cover, Vol. 282, Issue 15.
Auxin Action Revealed, Nature, April 5, 2007.
Glucose-1-phosphate uridylyltransferase, Protein Science, March 3, 2007 Cover, Volume 16 Issue 3.
How Ribosomes Work, Chemical & Engineering News, Feb. 19th, 2007.
HIV's Hidden Weakness, Nature, Feb. 15th, 2007.
Sen1 Control of RNA Pol II Termination, Molecular Cell, December 8, 2006 Cover, Volume 24 Issue 5.
Transposon Loops, Molecular Microbiology, December 1, 2006 Cover, Volume 62 Issue 6.
Glycosylation Engineering, Chemical & Engineering News, Sept. 4th, 2006.
Chromatin Code Decoded, Nature, Aug. 17th, 2006.
Halogenases, Chemical & Engineering News, May 22nd, 2006.
Poly (2S-proline), Protein Science, January 1, 2006 Cover, Volume 15, Issue 1.
Ribonuclease A, JMB, November 18, 2005 Cover, Volume 354, Issue 1.
The B to Z of DNA, Nature, Oct. 20th, 2005.
GalNAc kinase, JBC, September 23, 2005 Cover, Volume 280, Issue 38.
Neurotransmission, Nature, Sept. 8th, 2005.
Science, July 22nd, 2005.
JMB, June 24, 2005 Cover, Volume 349, Issue 5.
Probing Prions, Nature, June 9th, 2005.
Science, April 29th, 2005.
Science, Sept., 10th, 2004.
Science, Jan. 23rd, 2004.
Pae SmAP1 14-mers, Protein Science, April 2003.
Nature, April 27th, 2006.
Cross-Beta Spine of IAPP, Protein Science, September 2008.
Calcium Sensor, JBC, August 4, 2006.
DAXX helical bundle (DHB) and DHB/Rassf1C structures, Structure, December 2010.
