Overview

Sets how bonds are made when loading a file.

Values:

0 = distance-based (excluding HETATM to HETATM) and CONECT records
1 = CONECT records
2 = distance-based, ignores CONECT records
3 = distance-based (including HETATM to HETATM) and CONECT records
4 = for loading mmCIF: use the chemical components dictionary to look up bonds (in PyMOL 1.7.4, components.cif needs to be present in the current directory, later versions have a subset of the dictionary bundled with PyMOL, and look up unknown residues from a web service)

Syntax

# ignore CONECT records
set connect_mode, 2