Difference between revisions of "Category:Script Library"

Latest revision as of 12:07, 14 December 2011

	PyMOL Script Library
Running Scripts	Script Requests	Policy
Structural Biology	Objects and Selections	Math/Geometry/CGO
AAindex AngleBetweenHelices Angle between domains AutoMultiFit Average b BbPlane BiologicalUnit BiologicalUnit/Quat Bondpack Cart to frac Ccp4 contact Ccp4 ncont Ccp4 pisa Centroid ColorByRMSD Color By Mutations Color by conservation Colorblindfriendly Colorbydisplacement Consistent View/ Map Inspect Contact Surface CreateSecondaryStructure Cyspka Displacementmap DistancesRH Draw Protein Dimensions Dssp Dssr block DynoPlot Elbow angle FindSurfaceCharge FindSurfaceResidues Helicity check HighlightAlignedSS InterfaceResidues Intra xfit Iterate sses LigAlign Load aln Load new B-factors Mcsalign Measure Distance Motif Msms surface Nmr cnstr PDB plugin Pairwise distances Propka Resicolor plugin RmsdByResidue Rotamer Toggle RotationAxis ShowLigandWaters Show contacts Sidechaincenters Ss Sst Transformations Translate And Measure WriteSS Xfit	AlphaToAll Annotate v Cluster Count CollapseSel Color Objects Color cbcobj ConnectedCloud Count molecules in selection DistancesRH Expand To Surface FindObjectsNearby FindSurfaceCharge FindSurfaceResidues Find buried waters Findseq Flatten obj GetNamesInSel Get Coordinates I Get Coordinates II Get raw distances Grepsel ListSelection2 List Colors List Secondary Structures List Selection Pairwise distances Removealt Rotkit SaveGroup Save sep SelInside SelectClipped Selection Exists ShowLigandWaters Split Movement Split Object Along Axis Split selection ToGroup Zero residues	Axes BbPlane BiologicalUnit BiologicalUnit/Quat Bounding Box CGO Text Cart to frac Center of mass CgoCircle Cgo arrow Cgo grid Contact Surface Cubes Distancetoatom DrawBoundingBox Draw Protein Dimensions Dump2CGO Ellipsoid Mark center Modevectors Perp maker Plane Wizard Radius of gyration RotationAxis Slerpy SuperSym Supercell Symmetry Axis TransformSelectionByCameraView
User Interface	Biochemical Scripts	System Scripts
Aa codes Apropos Distancetoatom Dynamic mesh Format bonds Frame slider Get colors Grepset ImmersiveViz Inertia tensor Key Wait Make Figures Mouse modes Movie color fade Movie fade Movit ObjectByArrows ObjectFocus PDB Web Services Script PowerMate Dial OS X Pytms Quickdisplays RUCAP UM-5 Save2traj Save settings Set toggle Spectrumbar Stereo Figures Stereo ray VisLoad	AAindex Average b Color cbcobj Color h CreateAtom Cyspka DistancesRH Distancetoatom FindSurfaceCharge FindSurfaceResidues Forster distance calculator ListSelection2 Load new B-factors Pairwise distances Polarpairs Propka Pucker Pytms Quickdisplays Resicolor ShowLigandWaters Show aromatics Show charged Show contacts Show hydrophilic Show hydrophobics	FetchLocal FilterByMol Find symbol LoadDir Monitor file continuously Pdbsurvey Pml2py Process All Files In Directory PythonTerminal Read PDB-String Tiff2ccp4 XML-RPC server
Third Party
Ccp4 contact Ccp4 ncont Ccp4 pisa PoseView PovRay Pymol2glmol RUCAP UM-5 Rasmolify Save Mopac Tiff2ccp4 Transform odb Wfmesh

Subcategories

This category has the following 7 subcategories, out of 7 total.

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T

ThirdParty Scripts

U

UI Scripts

Pages in category "Script Library"

The following 197 pages are in this category, out of 197 total.

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Jump

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Uniprot features

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VisLoad

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Zero residues

@@ Line 1: / Line 1: @@
-The PyMOLWiki script library houses many useful scripts.  Here you will find premade scripts that will extend the power of PyMOL.
+{| style="text-align: left; background: #D9CEB2; color: #7A6A53; border: 2px solid #D5DED9; padding: 3em;" align="center"
+|-
-The scripts are now categorized based on their function.  Someone may have added a script but not listed it on this page, therefore please see the autogenerated list of scripts at the bottom of this page.
+! style="padding-top: 1em; padding-bottom: 2.5em; font-size: 1.25em; text-align: center;" |
+! style="padding-top: 1em; padding-bottom: 2.5em; font-size: 2.5em; text-align: center;" |  PyMOL Script Library
-Please post any script requests to this page's discussion page.  Who knows, someone might have already written it or would be willing to write it.
+! style="padding-top: 1em; padding-bottom: 2.5em; font-size: 1.25em; text-align: center;" |
+|-
-== [[:Category:UI_Scripts|User Interface]] ==
+! style="padding-bottom: 4em; font-size: 1.25em; text-align: center;" |  [[Running_Scripts|Running Scripts]]
-<DPL>
+! style="padding-bottom: 4em; font-size: 1.25em; text-align: center;"| [[Category_talk:Script_Library#Requests|Script Requests]]
-category=UI_Scripts
+! style="padding-bottom: 4em; font-size: 1.25em; text-align: center;"| [[Category_talk:Script_Library#Policy|Policy]]
+|-
+! style="font-size: 1.25em; " | [[:Category:Structural_Biology_Scripts|Structural Biology]]
+! style="font-size: 1.25em; " | [[:Category:ObjSel_Scripts|Objects and Selections]]
+! style="font-size: 1.25em; " | [[:Category:Math_Scripts|Math/Geometry/CGO]]
+|- valign=top
+|<DPL>
+category=Structural_Biology_Scripts
 redirects=include
 mode=unordered
+format = <ul type="disc">,<li>[[%PAGE%]],</li>,</ul>
 </DPL>
+||
-== [[:Category:ObjSel_Scripts|Objects and Selections]] ==
 <DPL>
 category=ObjSel_Scripts
 redirects=include
 mode=unordered
+format = <ul type="disc">,<li>[[%PAGE%]],</li>,</ul>
 </DPL>
+||
-== [[:Category:System_Scripts|System (OS/Filesystem/Web/etc)]] ==
 <DPL>
-category=System_Scripts
+category=Math_Scripts
 redirects=include
 mode=unordered
+format = <ul type="disc">,<li>[[%PAGE%]],</li>,</ul>
 </DPL>
+|-
-== [[:Category:Structural_Biology_Scripts|Structural Biology]] ==
+! style="font-size: 1.25em; padding-top: 3.5em; width:33%;" | [[:Category:UI_Scripts|User Interface]]
-<DPL>
+! style="font-size: 1.25em; padding-top: 3.5em; width:33%;" | [[:Category:Biochemical_Scripts|Biochemical Scripts]]
-category=System_Scripts
+! style="font-size: 1.25em; padding-top: 3.5em; width:33%;" | [[:Category:System_Scripts|System Scripts]]
+|- valign=top
+|<DPL>
+category=UI_Scripts
 redirects=include
 mode=unordered
+format = <ul type="disc">,<li>[[%PAGE%]],</li>,</ul>
 </DPL>
+||
-== [[:Category:ThirdParty_Scripts|Third Party]] ==
 <DPL>
-category=ThirdParty_Scripts
+category=Biochemical_Scripts
 redirects=include
 mode=unordered
+format = <ul type="disc">,<li>[[%PAGE%]],</li>,</ul>
 </DPL>
+||
-== [[:Category:Biochemical_Scripts|Biochemical Scripts]] ==
 <DPL>
-category=Biochemical_Scripts
+category=System_Scripts
 redirects=include
 mode=unordered
+format = <ul type="disc">,<li>[[%PAGE%]],</li>,</ul>
 </DPL>
+|-
-== [[:Category:Math_Scripts|Math/Geometry/CGO]] ==
+! style="font-size: 1.25em; padding-top: 3.5em; width:33%" | [[:Category:ThirdParty_Scripts|Third Party]]
-<DPL>
+! style="font-size: 1.25em; padding-top: 3.5em; width:33%;" |
-category=Math_Scripts
+! style="font-size: 1.25em; padding-top: 3.5em; width:33%;" |
+|- valign=top
+|<DPL>
+category=ThirdParty_Scripts
 redirects=include
 mode=unordered
+format = <ul type="disc">,<li>[[%PAGE%]],</li>,</ul>
 </DPL>
+|}
 [[Category:Scripting|Script Library]]

Difference between revisions of "Category:Script Library"

Latest revision as of 12:07, 14 December 2011

Subcategories

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Pages in category "Script Library"

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C

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M

O

P

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