Cartoon transparency
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Overview
This setting changes the transparency of the cartoon representation.
As of PyMOL version 2.3, cartoon transparency is now an atom-level setting. This allows for a cartoon selection to be transparent without creating an additional object.
Syntax
set cartoon_transparency, 0.5, <object> # 50% transparent, the object name is optional
set cartoon_transparency, 0.5, <sele> # 50% transparent, sele: the selection name
Valid values range from 0.0 (fully opaque) - 1.0 (fully transparent)
Examples
Cartoon Transparency
Cartoon Atom-level Transparency
