Difference between revisions of "Bond"

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===DESCRIPTION===
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'''bond''' creates a new bond between two selections, each of which should contain one atom.  You can easily create a new bond by selecting two atoms, each with the CTRL-MIDDLE-MOUSE-BUTTON and typing "bond" on the command line.
  "bond" creates a new bond between two selections, each of
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  which should contain one atom.
 
 
 
===USAGE===
 
===USAGE===
   
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  bond [atom1, atom2 [,order]]
  bond [atom1, atom2 [,order]]
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===PYMOL API===
 
===PYMOL API===
   
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  cmd.bond(string atom1, string atom2)
  cmd.bond(string atom1, string atom2)
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===NOTES===
 
===NOTES===
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The atoms must both be within the same object.
 
   
 
   
  The atoms must both be within the same object.
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The default behavior is to create a bond between the (lb) and (rb) selections.
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  The default behavior is to create a bond between the (lb) and (rb)
 
  selections.
 
 
 
===SEE ALSO===
 
===SEE ALSO===
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[[Unbond]], [[Fuse]], [[Attach]], [[Replace]], [[Remove_picked]]
  [[Cmd unbond]], [[Cmd fuse]], [[Cmd attach]], [[Cmd replace]], [[Cmd remove_picked ]]
 
 
 
  
[[Category:Commands|bond]]
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[[Category:Commands|Bond]]
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[[Category:Editing Module|Bond]]

Latest revision as of 14:27, 17 November 2009

bond creates a new bond between two selections, each of which should contain one atom. You can easily create a new bond by selecting two atoms, each with the CTRL-MIDDLE-MOUSE-BUTTON and typing "bond" on the command line.

USAGE

bond [atom1, atom2 [,order]]

PYMOL API

cmd.bond(string atom1, string atom2)

NOTES

The atoms must both be within the same object.

The default behavior is to create a bond between the (lb) and (rb) selections.

SEE ALSO

Unbond, Fuse, Attach, Replace, Remove_picked