Autodock plugin

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Revision as of 12:04, 4 December 2011 by Tlinnet (talk | contribs) (Installation)
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Description

This plugin should help to set up docking runs with Autodock and view docking results. It has two features:

  1. Setup of a docking grid for Autodock with PyMOL.
  2. View the docking results.

Installation

The plugin is now automatically available in the project Pymol-script-repo.
It is available only with the the Vina executable, since it has been found that Vina is orders of magnitudes faster than Autodock4.

Or you can download it manually

  1. Download plugin
  2. PyMOL > Plugin > Install Plugin
  3. MGLTools/AutoDockTools
  4. AutoDock4.2
  5. AutoDock Vina

Tutorial Video

Watch Dan Seeliger's autodock plugin tutorial.

Author

Daniel Seeliger

Python Code

Download: plugins/autodock_plugin.py
This code has been put under version control in the project Pymol-script-repo