Difference between revisions of "Autodock plugin"

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== Installation ==
 
== Installation ==
The plugin is now automatically available in the project [http://www.pymolwiki.org/index.php/Git_intro Pymol-script-repo].<br>
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you can download it manually
It is available only with the the Vina executable, since it has been found that Vina is orders of magnitudes faster than Autodock4.
 
 
 
Or you can download it manually
 
 
# Download [http://wwwuser.gwdg.de/~dseelig/adplugin.html plugin]
 
# Download [http://wwwuser.gwdg.de/~dseelig/adplugin.html plugin]
 
# '''PyMOL > Plugin > Install Plugin'''
 
# '''PyMOL > Plugin > Install Plugin'''

Revision as of 11:10, 4 December 2011

Description

This plugin should help to set up docking runs with Autodock and view docking results. It has two features:

  1. Setup of a docking grid for Autodock with PyMOL.
  2. View the docking results.

Installation

you can download it manually

  1. Download plugin
  2. PyMOL > Plugin > Install Plugin
  3. MGLTools/AutoDockTools
  4. AutoDock4.2
  5. AutoDock Vina

Tutorial Video

Watch Dan Seeliger's autodock plugin tutorial.

Author

Daniel Seeliger