Difference between revisions of "Alter State"

From PyMOLWiki
Jump to navigation Jump to search
(redirect iterate)
 
(4 intermediate revisions by 2 users not shown)
Line 1: Line 1:
===DESCRIPTION===
+
#REDIRECT [[iterate]]
 +
 
 
'''alter_state''' changes the atomic coordinates of a particular state using the python evaluator with a separate name space for each atom.  The symbols defined in the name space are:
 
'''alter_state''' changes the atomic coordinates of a particular state using the python evaluator with a separate name space for each atom.  The symbols defined in the name space are:
 
* x
 
* x
Line 20: Line 21:
  
 
===SEE ALSO===
 
===SEE ALSO===
[[Cmd iterate_state]], [[Cmd alter]], [[Cmd iterate]]
+
[[Iterate_State]], [[alter]], [[iterate]]
  
[[Category:Commands|alter_state]]
+
[[Category:Commands|Alter State]]
 +
[[Category:States|Alter State]]

Latest revision as of 17:01, 23 December 2015

Redirect to:

alter_state changes the atomic coordinates of a particular state using the python evaluator with a separate name space for each atom. The symbols defined in the name space are:

  • x
  • y
  • z

USAGE

alter_state state,(selection),expression

EXAMPLES

# Alter the X coordinate for all
alter_state 1,(all),x=x+5

#Shift the coordinates of the entire PDB file
alter_state 1,selection,(x,y,z)=(newx,newy,newz)

SEE ALSO

Iterate_State, alter, iterate