Difference between revisions of "All states"
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Revision as of 17:10, 2 November 2007
Overview
When set "on", this setting causes PyMOL to display all states or in NMR jargon: all the models in the ensemble. The 'default' behavior (OFF) can be overridden by placing the "set all_states, on" statement into your '.pymolrc' file, located in your login directory (under all flavors of unix).
Syntax
set all_states, on
set all_states, off
Example
import urllib2
pdbCode = '1BRV'
pdbUrl = 'http://www.rcsb.org/pdb/downloadFile.do?fileFormat=pdb&compression=NO&structureId='+pdbCode
pdbFile = urllib2.urlopen(pdbUrl)
pdbContent = pdbFile.read()
cmd.read_pdbstr(pdbContent, pdbCode)
set all_states, on
This shows the effect of turning on/off the all_states setting used with the script above.
set all_states, on
set all_states, off
