Jump to content
Main menu
Main menu
move to sidebar
hide
Navigation
Main page
Recent changes
Random page
Help
Special pages
SBGrid Resources
SBGrid Consortium
SBGrid Data Bank
Software Webinars
PyMOL Webinar
PyMOL Wiki
Search
Search
Appearance
Create account
Log in
Personal tools
Create account
Log in
Pages for logged out editors
learn more
Contributions
Talk
Editing
Windows Install
(section)
Page
Discussion
English
Read
Edit
View history
Tools
Tools
move to sidebar
hide
Actions
Read
Edit
View history
General
What links here
Related changes
Page information
Appearance
move to sidebar
hide
Warning:
You are not logged in. Your IP address will be publicly visible if you make any edits. If you
log in
or
create an account
, your edits will be attributed to your username, along with other benefits.
Anti-spam check. Do
not
fill this in!
=== Pre-compiled Open-Source PyMOL === Pre-compiled Open-Source PyMOL is available free from [https://www.cgohlke.com/ Christoph Gohlke of the Laboratory for Fluorescence Dynamics, University of California, Irvine]. # Install the latest version of Python 3 for Windows (e.g., by going to http://www.python.org/downloads/ and choosing the x64 EXE installer). Use the standard options, which should mean that the installation directory is most likely C:\Users\<Your Username>\AppData\Local\Programs\Python\Python38). Make sure the option to add environment variables is selected or add the folder of python.exe to system PATH. # Install [https://support.microsoft.com/en-us/help/2977003/the-latest-supported-visual-c-downloads the current Microsoft Visual C++ Redistributable for Visual Studio 2015, 2017 and 2019]. Otherwise the installed PyMOL binary may fail to run (without any error message!). ## Have a look in "Add/Remove" programs if it's installed already # Download the [https://github.com/cgohlke/pymol-open-source-wheels/ appropriate wheel files], along with all requirement wheel files ([https://github.com/cgohlke/numpy-mkl-wheels/ Numpy+MKL]) into a single file directory, e.g., <code>C:\Users\<Your Username>\Downloads</code> # Example of filenames 2023-01-12 ## pymol_launcher-2.5-cp311-cp311-win_amd64.whl ## pymol-2.6.0a0-cp311-cp311-win_amd64.whl ## numpy-1.22.4+mkl-cp311-cp311-win_amd64.whl Navigate to the installation directory in a CMD window (Not PowerShell!) <source lang = python>cd C:\Users\<Your Username>\Downloads</source> (or where ever you put the files) and begin the installation using the command: ("%CD%" only works in CMD) <source lang = python> python -m pip pmw python -m pip install --no-index --find-links="%CD%" pymol_launcher-2.5-cp311-cp311-win_amd64.whl where.exe pymol pymol </source> PyMOL.exe should now be in C:\Users\<Your Username>\AppData\Local\Programs\Python To use the newer single-window Qt interface, also install the optional PyQt5 dependency for your Python installation: <source lang=python> python -m pip install pyqt5 </source> To update PyMOL update the files in the PyMOL install directory and run: <source lang = python> pip install --upgrade --no-deps pymol.whl </source> where <code>pymol.whl</code> is replaced by the PyMOL wheel file name (not the launcher, the launcher should not require updating).
Summary:
Please note that all contributions to PyMOL Wiki are considered to be released under the GNU Free Documentation License 1.2 (see
PyMOL Wiki:Copyrights
for details). If you do not want your writing to be edited mercilessly and redistributed at will, then do not submit it here.
You are also promising us that you wrote this yourself, or copied it from a public domain or similar free resource.
Do not submit copyrighted work without permission!
Cancel
Editing help
(opens in new window)
Search
Search
Editing
Windows Install
(section)
Add topic