Editing PySSA (section)

== User PyMOL interaction ==
[[Image:PySSAPredictionDialog.png|right|300px|thumb|Prediction dialog to set up a protein prediction using ColabFold]]
PySSA attempts to minimize the number of GUI components of the PyMOL window, providing the end-user with a nearly blank PyMOL viewer window to ensure that they are not distracted by buttons, command line interfaces, or log messages. This approach aims to provide a more intuitive user experience and PySSA is focusing exclusively on proteins and protein pairs within PyMOL. It should be noted that, at the present time, it is only possible to adjust (e.g., alter the color or representation) entire chains, rather than individual atoms. This represents a significant regression in the functionality for standard PyMOL users but ensures that the interaction remains centered on the end-user and easily understandable for those who work mainly in a laboratory.