Editing Load traj (section)

== Notes ==
*PyMOL does not know how to wrap the truncated octahedron used by Amber You will need to use the [http://ambermd.org/tutorials/analysis/tutorial0/index.htm cpptraj] program first to do this.
*The average option is not a running average.  To perform this type of average, use the [[smooth]] command after loading the trajectory file.
*For quickly viewing Trajectories as a movie, use the [[mset]] command to map each state to a movie frame.

useful notes from the email list:
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http://www.mail-archive.com/pymol-users@lists.sourceforge.net/msg04272.html
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http://www.mail-archive.com/pymol-users@lists.sourceforge.net/msg10266.html

in one line convert dcd and psf to pdb :

catdcd -o all.pdb -otype pdb -s autopsf.psf -stype psf out.dcd