Editing AKMT Lys pred (section)

== Data background ==
=== PDB structures in Sulfolobus Islandicus ===
Following structures was found June 2017
* www.rcsb.org -> Search advanced
* Biology -> Source organism -> Sulfolobus organism

{| class="mw-collapsible mw-collapsed wikitable" style="text-align: left;"
! PDB id !! Info !! Text !! Authors !! Released !! Method !! Residue Count !! Macromolecule !! Gene Name(s) !! UniProtKB AC !! NCBI - Accession Numbers
|-
| 4G2D || Entity 1 containing Chain A || Crystal structure of the hyperthermophilic Sulfolobus islandicus PLL SisLac || Hiblot, J., Gotthard, G., Chabriere, E., Elias, M. || 10/24/2012 || X-ray Diffraction || 315 || Aryldialkylphosphatase || M164_0332 || C4KKZ9 || ADX84410
|-
|5EWT || Entity 1 containing Chain A || Crystal structure of ExoIII endonuclease from Sulfolobus islandicus || Yan, Z., Yuan, Z.L., Gu, L.C., Shen, Y.L. || 11/23/2016 || X-ray Diffraction || 247 || Exodeoxyribonuclease III Xth || SiRe_0100 || F0NG49  || ADX84195
|-
|5JWJ || Entity 1 containing Chain A || NMR solution structure of a thermophilic lysine methyl transferase from Sulfolobus islandicus || de Lichtenberg, C., Stiefler-Jensen, D., Schwarz-Linnet, T., She, Q., Teilum, K. ||  5/24/2017 || Solution NMR || 172 || Protein-lysine N-methyltransferase ||  ||  || 
|-
|5F4H || Entity 1 containing Chain A, B, C, D, E, F || Archael RuvB-like Holiday junction helicase || Zhai, B., DuPrez, K.T., Doukov, T.I., Shen, Y., Fan, L. || 12/21/2016 || X-ray Diffraction || 505/3030 || Nucleotide binding protein PINc || LS215_1665 || C3MQK6 || ADX85498
|-
|5FA8 || Entity 1 containing Chain A || SAM complex with aKMT from the hyperthermophilic archaeon Sulfolobus islandicu || Chu, Y., Zhu, Y., Chen, Y., Li, W., Zhang, Z., Liu, D., Wang, T., Ma, J., Deng, H., Liu, Z.J., Ouyang, S., Huang, L. || 6/29/2016 || X-ray Diffraction || 161 || Ribosomal protein L11 methyltransf ||  ||  || 
|-
|5FAD || Entity 1 containing Chain A || SAH complex with aKMT from the hyperthermophilic archaeon Sulfolobus islandicus || Chu, Y., Zhu, Y., Chen, Y., Li, W., Zhang, Z., Liu, D., Wang, T., Ma, J., Deng, H., Liu, Z.J., Ouyang, S., Huang, L. ||  6/29/2016 || X-ray Diffraction || 161 || Ribosomal protein L11 methyltransf ||  ||  || 
|-
|3O27 || Entity 1 containing Chain A, B || The crystal structure of C68 from the hybrid virus-plasmid pSSVx || Contursi, P., D'Ambrosio, K., Pirone, L., Pedone, E.M., Aucelli, T., She, Q., De Simone, G., Bartolucci, S. || 1/19/2011 || X-ray Diffraction || 136 || Putative uncharacterized protein ||  ||  || 
|-
|3M1M || Entity 1 containing Chain A || Crystal structure of the primase-polymerase from Sulfolobus islandicus || Beck, K., Vannini, A., Cramer, P., Lipps, G. || 6/16/2010 || X-ray Diffraction || 335 || ORF904 ||  ||  || 
|-
|2K9I || Entity 1 containing Chain A, B || NMR structure of plasmid copy control protein ORF56 from sulfolobus islandicus || Weininger, U., Zeeb, M., Neumann, P., Low, C., Stubbs, M.T., Lipps, G., Balbach, J. || 10/20/2009 || Solution NMR || 110 || Uncharacterized protein ORF56 ||  ||  || 
|-
|3FT7 || Entity 1 containing Chain A, B || Crystal structure of an extremely stable dimeric protein from sulfolobus islandicus || Weininger, U., Zeeb, M., Neumann, P., Low, C., Stubbs, M.T., Lipps, G., Balbach, J. || 10/20/2009 || X-ray Diffraction || 110 || Uncharacterized protein ORF56 ||  ||  || 
|-
|1RNI || Entity 1 containing Chain A || Bifunctional DNA primase/polymerase domain of ORF904 from the archaeal plasmid pRN1 || Lipps, G., Weinzierl, A.O., Von Scheven, G., Buchen, C., Cramer, P. || 1/27/2004 || X-ray Diffraction || 216 || ORF904 ||  ||  || 
|-
|1RO0 || Entity 1 containing Chain A || Bifunctional DNA primase/polymerase domain of ORF904 from the archaeal plasmid pRN1- Triple mutant F50M/L107M/L110M SeMet remote || Lipps, G., Weinzierl, A.O., Von Scheven, G., Buchen, C., Cramer, P. || 1/27/2004 || X-ray Diffraction || 216 || ORF904 ||  ||  || 
|-
|1RO2 || Entity 1 containing Chain A || Bifunctional DNA primase/polymerase domain of ORF904 from the archaeal plasmid pRN1- Triple mutant F50M/L107M/L110M manganese soak || Lipps, G., Weinzierl, A.O., Von Scheven, G., Buchen, C., Cramer, P. || 1/27/2004 || X-ray Diffraction || 216 || hypothetical protein ORF904 ||  ||  || 
|-
|
|-
|}

=== Methylated peptide ===
Data from:
* mcp.M115.057778-3.xlsx
* mcp.M115.057778-4.xlsx

{| class="mw-collapsible mw-collapsed wikitable" style="text-align: left;"
! PDB id !! NCBI - Accession Number !! 'Methylated peptides' 'Sequence' in -3.xlsx !! 'Methylated peptides' ' Modification' in -3.xlsx s !! 'Methylated peptides' 'Sequence' in -4.xlsx !! 'Methylated peptides' ' Modification' in -4.xlsx s
|-
| 4G2D || ADX84410 Sequence 
| SIDEIADLFIHDIkEGIQATSNK <br> kIADKGSFIGLDR <br> ILmEEGVDPGkILIGHLGDTDNTDYIK <br> kNGmSEEVIDIIFK <br> SIDEIADLFIHDIkEGIQATSNK <br> SIDEIADLFIHDIkEGIQATSNK
| K14(Methyl) <br> K1(Methyl)  <br> M3(Oxidation); K11(Trimethyl) <br> K1(Methyl); M4(Oxidation) <br> K14(Dimethyl) <br> K14(Trimethyl)
| mRIPLVGkEPIEAEDmGFTLIHEHLR
| M1(Oxidation); K8(Trimethyl); M16(Oxidation)
|-
|}